Methanosarcina hadiensis: RSJ42_14495
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Entry
RSJ42_14495 CDS
T10775
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RSJ42_14495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhab03000
]
RSJ42_14495
03021 Transcription machinery [BR:
mhab03021
]
RSJ42_14495
Transcription factors [BR:
mhab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
RSJ42_14495
Transcription machinery [BR:
mhab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
RSJ42_14495
RNA polymerase III system
TFIIIB
RSJ42_14495
RNA polymerase I system
SL1/TIF-1B
RSJ42_14495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
XMB88512
LinkDB
All DBs
Position
complement(3369813..3370364)
Genome browser
AA seq
183 aa
AA seq
DB search
MSESSIKIENVVASTKLAEEFDLTVIESQFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCERGVEVVRQQLDNM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctagcattaaaattgagaatgtggtcgcatccaccaaactcgccgaagag
tttgatttaactgtgatcgaatcccagttcgaaggagctgaatataataagcagaagttc
cctgggctcgtctacagagtttctgaccctaaagctgcttttctggtttttacttccggg
aaggttgtctgtacaggagcaaaaaacgttgctgacgtgcacacagttattggaaacatg
gcaaaaaagctgaacagcatcggaatcaaaacaatggagaacccgcagatcactgttcaa
aatatagttgcctcagcagacctgcacactattcttaacctcaatgcaattgcaataggg
cttgggcttgagaacatcgaatacgaacccgagcagtttccgggtcttgtttacaggatc
gatgagcctaaagtggttgtccttattttcagttctggaaaactggttgttactggagga
aagtcccccgaagactgcgagaggggcgtagaagtagttcgccagcagctagacaacatg
gggcttttataa
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