Methanosarcina hadiensis: RSJ42_14510
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Entry
RSJ42_14510 CDS
T10775
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
mhab Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mhab03036
]
RSJ42_14510 (smc)
Chromosome and associated proteins [BR:
mhab03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RSJ42_14510 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
TolA_bind_tri
DUF7167
DcrB
CCDC39
Motif
Other DBs
NCBI-ProteinID:
XMB88515
LinkDB
All DBs
Position
complement(3372713..3376240)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYIKEIEFVNFKSFGKKVKISFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK
LTDLIYNGDEAKKPDFAQVTIRFDNTDRKMPLELDEIEVSRKVRRTKNAYYSYFYFNGKA
VSLGEIHSQLAKAGVTPEGYNVVMQGDVTQIISMSSVERRKIIDEIAGVAEFDERKQKAL
GELEIVRQQIERVDIILEEVRTQLEKLSGERDQALKYQSLKDEKIKFEGYVLLSKLKDAR
AELENVDKELSGKEEHFEKVQVLLNERIQELEALEKSLENLSLEIRKKGEDEQLQVKREI
EETKGEISRCVDSIEVTESELEEADARRRKAFVDIDSTKGKVRELEEKIETENVRKESIS
AELFERKTERMLLQSRIADIDAKFAATRDELMAARKKLEDVKNEKNELIRNEDRLLDALR
RKSSELREIENQIKDAQAAVTASDSDTLSVQYEVEKLTNNLESLIKDRDDIESSHFRIKE
DIKKLESRLHTLQQEYAIAEARVRASEQGGGYSRAVEMVIGASRQEDLFGIHGTIAQLGK
VDRRYAAALEVAAGNRMQAIVVDTDADAAEAIEFLKRKKGGRATFLPLNKMRDSRRLESL
NYENGVIGYAIDLIEFDPAFEPAFWYVFQDTLVMEDLSSARRLMGRARMVTLEGELLEKS
GAMVGGSLSSKSGISFAAAEKDKLLELAEEIRSLDASRNAAISKQDSIESHVFELSRKIR
DCESTISRKELEIQEIAGREAKLAELLEAKQADLKAIEESRTELRAEMDRVIAEKAEKES
IAAELEAQVAELEAKLADSPLPEINKKADFVDEELRRLDGRIRDTEASLNALHLEKEYAE
QKINEAKELIRDLDEKKASRRERVDSLKAKITELEAQLEEKQKRELQLSDELIGLQKERE
NVQAEHNAVKRRVSIAATTLEKAKQQVLTLTATKNALFDQEKQLLEEVRRRGLEETSEVP
SYETVYMRIQAIEEAMRRLEPVNMRAIDEYNEVEFRLSDLQGKRDTLFTEREQLLERIDQ
YEQLKRDAFMEAYTIINANFREIFYELSDGMGELLLENPDDPFAGGMTLRAQPKEKTLQR
IEAMSGGEKSLTALAFIFAIQQYRPAPFYAFDEIDMFLDGWNVERVSRRVKTSGSKVQFI
VVSLRKPMIQAANRTIGVTMQENNITSITGVKLNG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgtacataaaagagattgagttcgttaatttcaagtccttcggaaaaaaagtaaagatt
tccttttacaacgacttcaccactatttcaggtcctaacgggagtggaaagtcaaacatc
atagatgggattctctttgcactcgggctcacgagttccaggacactgagggctgaaaaa
ctcacggaccttatttataatggagacgaggccaaaaagcctgactttgcccaggttacg
atccgttttgacaataccgaccgcaaaatgccgttagagctcgatgaaattgaagtttca
agaaaggtcaggcggacaaaaaatgcctattacagttacttttattttaacggaaaagcc
gtgagccttggtgaaatccattcccagcttgcaaaggcaggagtaacgcccgaaggctac
aacgttgtaatgcagggagatgtcacacagattatttccatgagctctgtagaaaggcga
aagattattgacgagattgccggggttgcggagtttgacgagcgcaaacaaaaagcactt
ggggagcttgaaattgtcaggcagcagattgaacgagtggacattatccttgaagaagtg
cgtacccagctcgaaaagctctcaggggaacgggaccaggccctgaaataccagtctcta
aaggatgagaagattaagtttgaaggttatgtccttctctccaaactcaaggacgccagg
gccgaactggaaaatgtggataaggaactctcagggaaagaagagcacttcgaaaaagta
caggtgctgctgaacgaaaggatccaggaactggaagcccttgaaaaatccctggaaaac
ctctcccttgaaatccggaaaaaaggggaagacgaacagctgcaggttaaaagggaaata
gaggaaacaaaaggggaaatatcccgctgcgttgacagcatcgaagttaccgaatcagaa
ctcgaagaagctgatgcacggcgcagaaaagcattcgttgacattgattccacaaaaggc
aaggttagagagcttgaagagaagatagaaactgaaaacgtaaggaaggaaagcatctct
gcagaacttttcgaaagaaagaccgagcgtatgctgcttcagagcaggattgccgatata
gatgcaaaatttgcagcaacaagggacgagcttatggctgcccgcaaaaagctcgaggat
gttaaaaacgaaaagaatgagcttatccggaatgaagacaggcttcttgacgctctcagg
aggaagtcctcggaactgcgtgagattgaaaaccagatcaaggacgcacaggccgcagtc
actgcttcggacagcgatacactttctgtccagtatgaagtagaaaaactcacgaataac
cttgagtctctcataaaagaccgcgacgatatagagagcagccatttcaggatcaaagaa
gacataaagaaacttgagagcaggcttcacaccctccagcaggaatatgcaattgccgag
gcaagagtccgggcttcggaacagggcggaggttactcaagagccgtcgaaatggtaatc
ggggcttccaggcaggaagacctcttcggaatccacgggaccattgctcagttaggaaaa
gtagaccgcaggtatgcggctgcccttgaggttgctgcagggaacaggatgcaagccatt
gtcgtggatactgacgccgatgctgcagaagctatagaattccttaaacggaaaaaaggc
ggcagggctacatttcttccgcttaataaaatgagagattcaagaaggcttgaaagccta
aattacgaaaacggagtaattggttacgcaattgaccttatcgaattcgatccagccttc
gagcctgctttctggtatgtttttcaggataccctggttatggaagacctttccagtgcc
cgccgcctgatgggaagggcgagaatggtcactcttgaaggcgagcttcttgaaaagagc
ggggcaatggtcgggggctctctttcttcaaaatcaggtatctcttttgccgctgcggaa
aaagataaactccttgagcttgcggaagagataaggtcccttgatgcaagccggaatgcg
gcaatcagtaaacaggacagcattgaaagccatgtttttgaattgagccggaagatccgc
gactgtgagtctacgatttccagaaaagagctcgagattcaggaaattgctggcagggaa
gcaaaacttgcagagctccttgaagccaaacaggcagacctgaaagcaatagaagaatcg
agaaccgagctcagggctgaaatggacagggtaattgctgaaaaggcggaaaaggaaagc
attgcagctgaacttgaggctcaggttgccgaacttgaggcaaagcttgctgattctccc
ctacccgaaatcaataaaaaagccgattttgttgacgaagaactccgcaggctcgacggc
aggataagggatacggaagccagcctgaatgccctgcatcttgaaaaagaatatgctgag
cagaagatcaacgaagccaaggagcttataagagatcttgatgaaaagaaagcttcaaga
cgtgaaagagtggattctcttaaagcaaaaatcactgaacttgaagcgcagcttgaagag
aaacagaaacgtgaactccagctttccgacgagcttatagggctccagaaagaaagggaa
aatgttcaggctgaacataatgctgtaaagcgcagggtcagcatagctgcaacaaccctt
gaaaaggcaaagcagcaggtacttactctcacagctacgaaaaatgcacttttcgaccag
gaaaagcagctgcttgaagaggtacggaggagaggactcgaagagacctcagaggtcccg
agttatgaaaccgtttacatgaggattcaggcaatcgaagaagccatgcgcaggcttgaa
cctgtaaacatgcgggcaatagatgaatataacgaggtagagttcaggctttccgacctg
cagggcaaacgcgatacgctctttaccgagagggaacagctcctggaacgcattgaccag
tatgaacagcttaagcgggacgcctttatggaagcctatacaatcattaatgctaacttt
agagagatcttttacgaactttccgacggcatgggagaactcctgcttgaaaacccggac
gacccatttgccggagggatgactttgagggcccagccgaaagaaaaaaccctccagcgc
atagaagccatgtcaggaggagaaaagagtcttactgcacttgcttttatattcgcaatc
cagcagtaccgccctgctccgttctatgcttttgacgaaattgacatgttccttgacggc
tggaatgtggagagagtctcaaggcgagttaaaacatcgggctcaaaggtccagttcatt
gttgtttctttaagaaaacccatgattcaggctgcaaaccggacgatcggggttacaatg
caggagaataatatcacgagtattaccggagtgaagcttaatggctga
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