KEGG   Methanosarcina hadiensis: RSJ42_16435
Entry
RSJ42_16435       CDS       T10775                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mhab  Methanosarcina hadiensis
Pathway
mhab03030  DNA replication
mhab03410  Base excision repair
mhab03420  Nucleotide excision repair
mhab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mhab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RSJ42_16435
   03410 Base excision repair
    RSJ42_16435
   03420 Nucleotide excision repair
    RSJ42_16435
   03430 Mismatch repair
    RSJ42_16435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhab03032]
    RSJ42_16435
   03400 DNA repair and recombination proteins [BR:mhab03400]
    RSJ42_16435
DNA replication proteins [BR:mhab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    RSJ42_16435
DNA repair and recombination proteins [BR:mhab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     RSJ42_16435
   MMR (mismatch excision repair)
    Other MMR factors
     RSJ42_16435
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    RSJ42_16435
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: XMB88866
UniProt: A0ACH3WEV7
LinkDB
Position
complement(3847268..3848005)
AA seq 245 aa
MFKAAINAELLKDAIAALAVIVDEVRFKIKPEGISVKAVDPANVAMGIFELGSSAFEEYS
ADESEIGIDLNKITDLLGIADRNDTVRMELEEGNNKLHIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSGDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGRDFPILIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcaattgccgcactggctgta
attgtagatgaggtaaggttcaaaattaaacccgaaggtatttcagtaaaggcagttgat
cctgccaatgttgcaatggggatttttgagcttggatcatcagcttttgaggaatatagc
gctgacgagtctgagataggaatcgacctgaataaaattacagatctcctgggaattgcg
gacaggaatgatacagtgcggatggagcttgaggaaggaaacaataagctccatattgat
gtaggagggctgtcctatactctttctcttctggacccttcaacaatccgtgcagaacca
agagttcctcagctcgaactgcctgctaaagttgtcctgaacggtgcagacctcaggcgt
gccgttaaagccgcagaaaagataagcgaccatatgctcatgggagtttctggcgatact
ttctatatggaagcaaaaggtgatacagatcaggtccgcctggaaatgggcagagaccag
ttaatcgacctgaaagcaggtgaagcctgttccctcttctccctggactacctgacagat
atagtcaagccaacgaataaggtaaatgaggttactctctcccttggaagagatttccct
attctgattgactttgaaattgcaaacggtgcaggaagaatctcttacctgctggctccg
agaattgagtcggactaa

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