Methanosarcina hadiensis: RSJ42_16795
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Entry
RSJ42_16795 CDS
T10775
Name
(GenBank) DEAD/DEAH box helicase
Organism
mhab Methanosarcina hadiensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
XMB88929
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Position
3925238..3928450
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AA seq
1070 aa
AA seq
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MIILHAGRVGKQFFLWGESPAEKETSVVRRGRKPKIPIVKPYPYDSGVENLSSALELLLR
STDRKKAEKINVWIPTIGGNPVPSSPLVAEIPASEAEPSLIPWTVNAYPLEAEEAIVLLC
ACMGKKVLAPGIISGNDLLWWADALKFAGSLAAGQKYLPGVRGGEGEYRAFWEPVFSGED
AGELAKLAKQMPPAARALIPETSAVPPEMPAALAAKQFIEDSLDWIVRSEIGEKEPAKEA
RKRKSFDSVHDAWVSALKSPDGLIYGDEKELLQLSLRAREWQCPLTILTTSPFRFCFRLE
EPAAKEEIEEIEETESGKKDTKKGKDIADIEVPEGHWYVRYMLQSYEDPSLLIPVKEAWK
PKKGSPLKKYDVKNIRQFLLSSLGQASSISAEIASSLEAPNPSGYSLDMKEAYHFLTESA
ANLSQAGFGVLLPGWWTRKGTKTHLKAQANVKGKKKLQAGYGLTLDEIVSFDWEIALGDR
VLTVRELQALAKLKAPLVKFRGQWVEVKDAEIRAALEFWKKNPNGEASLREVLKLAVGVS
EKADGVDVEGLNATGWIGELISRLKDKTGFEELPAPDGFSGTLRPYQFRGYSWLAFLRQW
GIGACLADDMGLGKTVQTLALIQHDREQIEEKVEEKVDGRKAPKPVLLVCPTSVINNWRK
EASRFTPGLSVMVHHGTSRKKEEEFKKEAMSHAIVISSYGLLQRDLKFLKVVSWAGIVLD
EAQNIKNSETKQAKAARALEADYRIALTGTPVENNVGDLWSIMEFLNPGFLGSQAGFKRN
FFIPIQAERDQEASRRLKEITGPFILRRLKTDTSIISDLPEKMEMKTYCTLTKEQASLYA
AVLEDIEEAMEDAEEGIQRKGIILSALTRLKQVCNHPAQFLKDNSALLGRSGKLARLTEM
LDVVLENGEKALVFTQFAEMGKMLKEHLQASFGCEILFLHGGVPRKHRDRMLERFQEGKE
YLPIFVLSLKAGGTGLNLTRANHVFHFDRWWNPAVENQATDRAFRIGQTKNVEVHKFICA
GTFEEKIDEIIERKVQVAENVVGTGEDWLTELSNDELKDLLALREEAVGE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgataattcttcatgcaggaagagtcggaaaacagttcttcttatggggggaaagcccg
gctgaaaaagaaacttcggttgttcggcgcgggagaaagcctaaaatcccgattgtaaaa
ccctatccttatgattcgggcgttgaaaacctgtcttctgctcttgagctgctgctgaga
agtactgaccggaaaaaggcagagaaaattaacgtctggatcccaactatcggcgggaac
cctgtcccttccagccctctcgttgctgaaattcctgcatcggaagcagaaccttcattg
attccctggactgtcaatgcatatcctctggaagctgaagaagctattgttctcctctgt
gcctgtatgggaaaaaaggttcttgctcccggcataatctcgggaaatgacctactctgg
tgggcagatgctcttaaatttgcaggctcgctggccgcaggacagaaatacctgcctggt
gtcaggggcggggaaggggagtacagggctttctgggaacccgtattttccggagaagat
gccggagagctggcaaaacttgcaaagcaaatgcctcctgctgcaagggctctaattcct
gaaacatctgccgtgcctccggaaatgcctgctgctttagcggcaaagcagtttattgaa
gactctctcgactggatagtccggtccgagataggagaaaaagagcctgcaaaagaggca
cgcaaaagaaaatcctttgacagtgttcacgatgcctgggtttctgctcttaaaagcccc
gacgggctgatctatggagacgaaaaagagcttctgcagctttcgttaagggcccgtgaa
tggcagtgccccctcaccatcctcaccacttctcctttcaggttttgtttccggctggaa
gagccggctgcgaaagaagaaatcgaagaaatcgaagaaactgaatccggaaaaaaagat
actaaaaaaggcaaagatatagctgacatagaggttcccgaaggacactggtacgtccgc
tacatgcttcagtcctacgaagacccgagccttctgattcctgtaaaagaagcatggaag
ccaaaaaagggcagccctttgaaaaaatatgatgtgaaaaacattcgccaatttctgtta
tcttccctcgggcaggcttccagtataagtgcagaaattgcttccagccttgaagctccc
aatccgtccggatattcccttgatatgaaagaggcttaccacttcctgactgaaagtgca
gcgaatttaagtcaggccggtttcggggtacttctccctggctggtggacccgtaaaggt
acaaagacccacttaaaagcccaggctaatgttaagggcaagaagaagttacaggccgga
tacgggcttacactcgatgaaatcgtcagctttgactgggaaattgcccttggagacagg
gtgctgacagtcagagaactgcaggctcttgcaaagctcaaagctccgcttgtcaaattc
cgggggcagtgggtcgaggtaaaagatgcggaaatcagggctgcccttgagttctggaag
aaaaaccccaacggagaagcaagtctgcgcgaagttctaaaactagctgttggcgtttcc
gaaaaagctgatggtgtggacgttgaagggctcaatgcaaccggctggattggagaatta
atcagccgcttaaaggataaaaccggatttgaagaactcccggctcctgacggtttttca
ggcaccctccgcccttaccagttccggggttattcctggctcgctttcctgaggcagtgg
ggaataggagcctgccttgcagatgatatggggcttggcaaaaccgtccagacccttgct
cttatccaacatgaccgggaacagattgaagaaaaagttgaagaaaaagttgacggacgt
aaagccccgaaaccggtccttctggtctgccctacctctgttatcaacaactggagaaaa
gaggcttcccgctttactccgggactttcggtaatggtccaccacgggaccagccggaaa
aaggaagaggaattcaaaaaggaagctatgagccatgctattgtcatctcaagctatggc
cttttgcaacgggatcttaagtttttaaaggtggtttcctgggctggaatcgtacttgac
gaagcccagaacattaaaaattcggaaactaaacaggcaaaggcagccagggctcttgaa
gccgattatagaatagctcttactgggactccggttgaaaataacgtgggagacctctgg
tccataatggagtttttaaaccccggtttccttggcagccaggcaggtttcaagcggaat
ttctttattcccattcaggcagaaagagatcaagaggcttcaaggaggctgaaagaaatt
acaggccccttcatccttcgccgtttgaagaccgacacttcgattatctccgacctgccg
gaaaaaatggagatgaaaacctattgtacgctgacaaaagaacaggcttccctctatgct
gcagtccttgaagacatcgaagaggcaatggaagacgcagaagaaggcatccagagaaaa
ggcataatcctgtctgcccttaccaggctcaagcaggtctgcaaccacccggcgcagttt
ttaaaggacaactctgctttactcggcaggtctggaaaactcgcaaggcttactgaaatg
ctggatgtagtccttgaaaacggggaaaaagcccttgttttcacccagtttgcggagatg
ggaaaaatgctaaaagagcacctgcaggcgagctttggctgtgaaatccttttcctgcac
ggcggggttcccagaaagcatagagatcgaatgcttgagcgcttccaggaagggaaagaa
tacctccctatctttgttctctcccttaaagcgggcggcacagggcttaaccttacaaga
gccaaccacgtttttcacttcgaccgctggtggaacccggctgttgaaaaccaggctaca
gacagggcgttccgtataggccagacgaagaacgttgaggtgcataagttcatctgtgcg
ggcacgtttgaagaaaaaatcgatgagattatcgagcgcaaagtgcaggtcgcagagaac
gttgtcggaacaggcgaagactggcttacagaactttctaacgatgaattgaaggatctt
cttgctcttcgagaagaggcggtaggtgaataa
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