Methanosarcina hadiensis: RSJ42_18505
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Entry
RSJ42_18505 CDS
T10775
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSJ42_18505 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhab03019
]
RSJ42_18505 (groL)
03110 Chaperones and folding catalysts [BR:
mhab03110
]
RSJ42_18505 (groL)
03029 Mitochondrial biogenesis [BR:
mhab03029
]
RSJ42_18505 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhab04147
]
RSJ42_18505 (groL)
Enzymes [BR:
mhab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RSJ42_18505 (groL)
Messenger RNA biogenesis [BR:
mhab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RSJ42_18505 (groL)
Chaperones and folding catalysts [BR:
mhab03110
]
Heat shock proteins
HSP60 / Chaperonin
RSJ42_18505 (groL)
Mitochondrial biogenesis [BR:
mhab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RSJ42_18505 (groL)
Exosome [BR:
mhab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RSJ42_18505 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RSJ42_18505 (groL)
Exosomal proteins of breast cancer cells
RSJ42_18505 (groL)
Exosomal proteins of colorectal cancer cells
RSJ42_18505 (groL)
Exosomal proteins of bladder cancer cells
RSJ42_18505 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7178
GTP-bdg_M
Motif
Other DBs
NCBI-ProteinID:
XMB89240
LinkDB
All DBs
Position
4320435..4322045
Genome browser
AA seq
536 aa
AA seq
DB search
MASKQIMFDESARKALLSGVDKVANTVKITLGPKGRYVVLDKATKPVVTNDGVTIAKEIE
LHDKFENMGAKLVKEVASKTQDNTGDGTTTATLLAQSMIREGLKNISAGANPIEVKKGIE
IATEKVVGYLKGKSVEVKGKDKIIQVATISANNDEEIGNLIADAMERVGYNGVITVEDSK
TMETSLDVVEGMQFDRGFVSPYMALDTEKMICEFEDPYILITDKKINSMKQIVPVLEKVA
SEGRSLLIIAEDVDGDAQAALILNIIRGALRVCAVKAPGFGNERKEMLEDIAVLTGGQVI
SEEKGMKLEEFSDYMLGSARKVTVDNHKTIIVEGRGDKADIDERVRIIEAQINIAEADYR
KTELKKRMAKLGGGVAVIKVGAATETELKEKKMRIDDALNATKAAVEEGVVTGGGISLFR
AAAVLDSLNLDGDRQVGVKIVQRAIEDPVRQIATNAGKEGAEVVATIKAESSEHFGYNAK
KDVFEDLFEAGVIDPTKVVRSGLQNAASIAGMVLTTEALVTDFDEEKDERTAAIII
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagcagataatgtttgatgaaagtgcaagaaaagcactcttaagcggtgtg
gataaagtcgcaaataccgttaagatcaccctggggcccaagggccgttacgtagttctg
gataaggctacaaaacccgtggtcacaaacgacggtgtcaccattgcaaaagaaatagag
ctccatgacaaatttgagaatatgggagccaaacttgtcaaggaagttgcttccaagacc
caggacaacacaggggacgggacaacaacagctacccttcttgcccagagcatgatcagg
gaaggtttaaagaacatcagtgccggagcaaaccctatagaagtcaagaaaggaattgag
attgccacggaaaaagttgtagggtatctcaagggcaagagtgtcgaggtaaagggcaag
gacaaaattattcaggtagccactatctctgcaaacaatgacgaagagataggaaacctg
attgccgatgctatggagagagtcggctacaatggtgtgatcaccgtcgaagattcaaaa
accatggaaaccagccttgatgtggttgagggtatgcagttcgaccgcggattcgtttct
ccctacatggctcttgatactgaaaaaatgatctgtgaatttgaagatccctatattctg
attacggacaaaaaaatcaacagcatgaagcagatcgtccctgtgcttgagaaagttgct
tctgaaggcagatccctcctgattattgctgaagatgtcgatggggacgcccaggctgcc
cttatcctgaacattatccgcggagctctcagggtttgcgctgtaaaagctccaggattt
ggaaatgagagaaaggaaatgctcgaggatattgctgtcctgaccggcgggcaggttatc
agcgaagaaaagggcatgaaacttgaagaattcagcgactatatgctcggaagtgccagg
aaagttacggttgataatcataaaaccattattgttgaaggaaggggcgataaagcagat
atcgatgagagagtaaggatcattgaagcccagatcaacattgctgaagccgattacagg
aagaccgaacttaaaaagcgcatggcaaagctgggaggcggtgttgcagtaattaaagtg
ggagctgcaacagaaaccgagctcaaggaaaagaagatgagaattgatgacgccctgaat
gcaacaaaagctgcagttgaggaaggtgtggtcacaggaggaggaataagccttttccgt
gcagctgcagtccttgattctcttaaccttgacggggacaggcaggtcggagtaaagatt
gtccagagagctatagaggaccccgtccgtcagatcgcaacaaatgcaggcaaagaaggc
gctgaagttgtagcaaccataaaggctgaatcgagcgaacacttcggatataatgcaaaa
aaagatgtgtttgaagacctctttgaagcaggcgtaattgacccgacaaaagtggtaagg
agcgggcttcagaacgctgcatcaattgcaggcatggtgcttactacagaagcccttgtg
acagacttcgatgaggaaaaggacgaaaggacagctgcaatcattatctga
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