Moraxella haemolytica: LU276_01995
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Entry
LU276_01995 CDS
T09918
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mhac
Moraxella haemolytica
Pathway
mhac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU276_01995 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhac03019
]
LU276_01995 (rnr)
03016 Transfer RNA biogenesis [BR:
mhac03016
]
LU276_01995 (rnr)
Enzymes [BR:
mhac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LU276_01995 (rnr)
Messenger RNA biogenesis [BR:
mhac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LU276_01995 (rnr)
Transfer RNA biogenesis [BR:
mhac03016
]
Prokaryotic type
tRNA degradation factors
LU276_01995 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
CSD
Motif
Other DBs
NCBI-ProteinID:
WII95637
LinkDB
All DBs
Position
complement(433380..435626)
Genome browser
AA seq
748 aa
AA seq
DB search
MKKNQTTPIWNDPNAHDEANKYQNPIPSRLLILQTIAQLNNDSKPATMESLGLHFEILGD
EERFFALTNRLKAMLRDKQLERTDGIHFSIAPLPTTVTGRIIANPKGFGFITLDDMPDLF
VHEKQMRVVFDGDVVEAVASEFRGNPEARITNIISRASTEFVGVIQRDDDGYFVQLSGAN
SHQPITLTDDEVARFGVGVGDSVKVAIIDMPTYQEYATGKISEVLTHLNDRELIIETTLL
NHGIPFEFSKATLEQADSYGEPTIADCAGRVDLRDLPLITIDGEDARDFDDAVYACKRAG
GNYRVVVAIADVSHYVTPQSPLDIDAYERGTSVYFPHRVIPMLPEVLSNGLCSLNPKVDR
LCMVADIKLSKAGKVTGYEFYPAVMHSQARLTYNQVNAYFDDPTNETLPDDLVKNPAVCK
SVDTLYQLYQILDKKRTERGAMAFETAESYIVFGKDGDIKDIKKRTRGDAHKLIEEMMLL
ANTCGANFALKHDLPALYRNHDKPSDEKSAKLSEYLKSFGLSFPDESPSHADYQRVIKAT
EGRADTQSIHSMLLRSMMQANYSPDNIGHFGLAYDEYSHFTSPIRRYPDLMLHRAIKDKT
TGKKSKNTIYKTLDEAGEQTSITERRAEEASRHVEAWLKCHYMQKHLGDEFMGTITTVTN
FGLFITLNDLFIDGLIHISNLSAEYYEYNEREQALIGERGSIFKLGEQLLIKVAGVNMDL
LQVDFVLVEKTDKTPKKTKTSKGKKKKS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatcaaacaacacctatctggaacgaccccaatgcccacgatgaggcaaat
aaataccaaaaccccattccttcacgcctgcttatcctacaaaccattgcccaattaaat
aacgacagcaaacctgccacaatggaaagtttgggactacattttgaaattttgggcgac
gaagagagattttttgccctaaccaaccgcttaaaagcaatgctaagagacaagcaatta
gaacgcactgatggcattcattttagcattgcacccttgcctaccaccgtaacgggtaga
atcatcgccaatcctaaaggctttggttttatcacactagatgacatgcctgacttattt
gtccatgaaaaacaaatgcgtgtggtctttgatggtgatgtggtagaggctgtggcaagc
gaatttcgtggcaacccagaggctcgcattacaaacatcatcagccgagccagtactgag
tttgttggtgtcatacagcgtgatgatgacggctactttgttcagttatcaggagcaaat
agtcatcaacccatcacactgaccgatgatgaggtggcacgctttggcgtgggtgtgggc
gatagcgtcaaagtggcaattattgatatgcccacttatcaagaatacgccacaggcaaa
atcagtgaggttctaacccacctaaacgaccgtgaattaatcattgagaccaccttacta
aatcacggcataccgtttgagtttagtaaagctacactagaacaagcagacagctatggt
gagccaactatagcagattgtgcagggcgagtggatttgcgagatttgccactcatcacg
attgatggcgaggatgcaagagactttgatgatgcggtctatgcgtgcaaacgggcagga
ggcaactaccgtgtggtggttgccatcgctgatgtcagccactatgtgaccccccagtcg
cctcttgatatagatgcttatgagcgtggcacaagcgtgtattttccccaccgtgtaatt
cccatgctcccagaggtactgtctaacggtctatgctcactcaaccccaaagtagatcgc
ctttgtatggtggcggatattaagctatctaaagcaggcaaggtaacaggctatgagttt
tatcctgctgtcatgcattcgcaagctcgcttgacttataatcaagtaaatgcttatttt
gacgaccccaccaatgagaccttgcctgatgatttggtcaagaaccctgctgtgtgtaaa
tcggtagataccctgtatcaactttatcaaattttggataaaaagcgtaccgagcgtggt
gcaatggcgtttgaaacagcggaaagttacatcgtctttggcaaagatggcgacattaaa
gacatcaaaaaacgcactcgtggcgatgctcacaaactcattgaagagatgatgctactt
gctaatacttgtggggcaaattttgctcttaaacacgatttacctgccttgtatcgcaac
catgacaagccatccgatgaaaaatccgccaaactttctgaatatcttaaatcctttggc
ttatccttccctgatgaatcgcccagtcatgctgactatcaacgagtcatcaaggcgacc
gaaggacgagctgatacccaaagcattcactctatgctactgcgttctatgatgcaggca
aattatagccctgataatatcggtcattttggtttggcatatgatgaatacagccatttt
accagtccaattcgccgttatcccgaccttatgctccatcgagccattaaggataaaaca
acaggaaaaaaatctaaaaacacgatttataaaaccttagatgaagcaggtgaacaaact
tccatcaccgaacgccgtgctgaagaggcaagccgccatgtagaggcatggttgaagtgc
cattatatgcaaaagcacttgggtgatgaatttatgggaacaatcaccaccgtaacaaat
tttgggctattcatcacactcaatgatctatttatcgatgggctaattcacatctcaaat
ctatcagctgagtattatgaatacaatgagcgagagcaagcactcattggcgagcgtggt
agcatctttaaactgggcgaacagcttttgattaaggttgctggcgtgaatatggatttg
ttgcaggtggactttgtattggtagaaaagacggacaaaacacccaaaaaaaccaaaacc
agtaaaggtaaaaagaaaaaatcctaa
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