Mycobacterium haemophilum: B586_14790
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Entry
B586_14790 CDS
T04111
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mhad
Mycobacterium haemophilum
Pathway
mhad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B586_14790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhad03019
]
B586_14790
Messenger RNA biogenesis [BR:
mhad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B586_14790
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKN17555
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Position
1582632..1584308
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AA seq
558 aa
AA seq
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MDVDLAPPGPLASGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLI
LPDLRHIEDRLDDIEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAAKCREHR
IKPVFVEVAEGQSSRHGVFECEYFAVNHSIPDALAITVYTSAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARDLGFLRVDDSDLIDIAAAEMMAPEQV
VLITTGTQGEPMSALSRMSRGEHRSITLTSGDLVVLSSSLIPGNEEAVYGVIDALAKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRHVMPVHGTWRMLRANAKLAASTGVSQESI
LLAENGVSVDLVAGKATIAGAVPVGKMFVDGLITGDVGDITLGERLILSSGFVAVTVVVK
RGTGRSATVPQLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQAVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtagacctagccccaccaggtcctctggcctcaggtgggttgcgggtcaccgcg
ttgggcggcatcagcgaaatcggccgcaatatgacggttttcgagcatctgggccggctg
ctgatcatcgactgcggtgtgctgttccccggccacgacgagcccggcgtcgacctgatc
ctgccggacctgcgccatatcgaagaccggctcgacgacatcgaggcgctggtgctgacc
catgcgcacgaggaccacattggtgcgatcccgttcttgctcaagctgcggcccgacatc
ccggtcgtcggctcgaagttcaccttggccttggtcgccgcgaaatgccgtgaacaccgc
atcaaaccggtgttcgtcgaggtcgccgaggggcagagctctcggcacggcgtgttcgag
tgcgagtacttcgccgtcaaccattccatcccggacgcgctggccatcacggtctacacg
agcgcgggaacggtgttgcacaccggcgacatcaagctcgatcaactgccgctcgacggc
cgccctaccgacctgcccggcatgtcccggctgggcgacgctggtgtggacctcttcctg
tgcgactcaaccaacgccgagatacccggcgtcggacctagcgaaagcgaggtgggtccg
acactgcatcggctgattcggggtgccgacgggcgggtcatcgtggcgtgtttcgcctcc
aatgtggaccgggtgcagcagattatcgatgccgcagtggcattgggccggcgggtgtcg
ttcgtcggacggtcgatggtccgcaacatgggcatcgcgcgggacctcggattcctgcga
gtagacgattcggatctgattgacatcgccgctgccgagatgatggcgccagaacaggtg
gtgctgattaccaccggcacccagggtgagccgatgtcggcgctgtcgcggatgtcgcgc
ggcgagcatcggagcatcacgctgacctctggtgatctcgtcgtgttgtcgtcgtcgctg
atccctggcaacgaagaagcggtctacggcgtcatcgacgcgctcgccaagatcggagct
cgagtcgtcaccaacgcccaagcccgggtgcatgtttcgggtcacgcctacgctggtgag
ctgctgttcttgtacaacggggtgcggccgcgccacgttatgccggtgcacggcacttgg
cggatgcttcgcgccaatgccaagctggccgccagcactggggtgtcgcaggagtcaatt
ctgttggccgagaacggtgttagcgttgatttggtcgctggcaaagccactatcgccggc
gccgttccggtcggcaagatgttcgtcgacggactgattaccggcgatgtcggcgatatc
accttgggcgaacggctcatcttgtcctcgggttttgtcgcggtcactgtggtggtgaag
cgtggcactgggcgttcagccactgtgccgcaactgcattcacgcggattctccgaagac
cccaaagcgcttgagcctgcggttcgcaaggttgaggcagagctggagtcgctggtcgcc
gcgaacgtgaccgacccgatccggatcgcccaggccgtccgccgcaccgtcggcaaatgg
gtaggcgaaacctatcgtcggcagccgatgatcgtgccgacggtcatcgaagtgtga
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