Mannheimia haemolytica D153: F382_09200
Help
Entry
F382_09200 CDS
T02746
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mhae
Mannheimia haemolytica D153
Pathway
mhae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F382_09200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhae03021
]
F382_09200
03400 DNA repair and recombination proteins [BR:
mhae03400
]
F382_09200
Enzymes [BR:
mhae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F382_09200
Transcription machinery [BR:
mhae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F382_09200
DNA repair and recombination proteins [BR:
mhae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F382_09200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AGQ26110
LinkDB
All DBs
Position
1779288..1783571
Genome browser
AA seq
1427 aa
AA seq
DB search
MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQFMDAEERWGDEFEAK
MGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKITKRLKTLEAFLQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLRLHQCGLPKKMALELFRPFIYSKLENRGIASTIKAAKKMVEREDPIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNGKGEGMYFLDPREAEKAYRT
GQAELHSRVKVRVTEYEKNEAGELEAKTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKK
AISKLINESYRRLGLKESVVLADQIMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEA
EVAEIQEQFNGGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIAMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTDEVLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIK
LTNAKFVTNKEGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVAN
WDPHTMPVISEVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALR
LVDSNGKDILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEAGI
AVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagtgaagtttttaaaagcacaaacaaaatcgaacgaagattttgatgtg
attaaaattggtttagcatcaccggacaagatccgttcttggtcttttggtgaagtgaaa
aaaccggaaaccattaactatcgtaccttcaaaccggagcgtgatggtttattctgtgca
cgtattttcgggccggtaaaagattacgagtgcttgtgtgggaaatacaaacgtttaaaa
caccgtggcgtaatttgtgaaaaatgtggtgttgaagtaacccaaactaaagtacgtcgt
gagcgtatggggcacattgaattagcttgccctgtcgcacacatctggttcttaaaatca
ctaccgtcccgtatcggtttaatcttagatatgccgttgcgtgatattgaacgtgtgctt
tattttgaatcttatgtagttactgaaccgggaatgaccgatttagagaaaaatcagtta
ttaaccgaagaacaatttatggacgctgaagagcgttggggtgatgaatttgaagcgaaa
atgggtgcagaaggtatccaagcattacttcgtgatttagatttagaacaccaatgcgaa
accttgcgtgaagagttacaagaaaccaattcagaaaccaagcgtaaaaaaatcactaag
cgtttaaaaaccttagaagcattcttacaatccggcaacaaaccggaatggatggtgatg
acagtattaccggtacttccaccggatttacgtccgttagtaccgcttgacggtggacgt
tttgcgacttctgacttaaacgatttataccgccgtgtaattaaccgtaacaaccgttta
aaacgcttgttagatttagttgcaccggacatcatcgtgcgtaacgaaaaacgtatgtta
caagagtcggttgatgcgttattagacaacggtcgccgtggtcgtgcgattaccggttcg
aacaaacgtccgttaaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgt
caaaacttattaggtaaacgtgtagattactcaggtcgttcggtaattaccgtaggccca
tacttacgcttacaccaatgtggtttaccgaagaaaatggcgttggaattattccgtccg
tttatctactcaaaattagaaaaccgtggcattgcttcaactattaaagccgcgaagaaa
atggtagagcgtgaagatcctatcgtatgggatattcttgccgaagtgattcgtgaacac
ccgattctacttaaccgtgcaccaacacttcaccgtttaggtatccaagcgtttgagccg
ttattgattgaaggtaaagcgatccagttacacccactcgtgtgtgcggcgttcaatgcg
gacttcgacggtgaccaaatggcggttcacgttccattaacccttgaagcacagttagaa
gctcgtgcgttaatgatgtcaaccaacaacgtactttcaccggcaagtggtgatccgatt
atcgtaccgtctcaggacgttgtactcggtctttactatatgacccgtgagaaagtaaac
ggtaaaggtgagggaatgtacttccttgaccctcgtgaagcggaaaaagcataccgtacc
ggtcaggctgaattacattctcgtgttaaagtgcgtgttactgaatatgagaaaaacgaa
gcaggcgaattagaagcaaaaacttcgttagtagataccaccattggtcgttcaatctta
tggatgattgcaccaaaaggtatgccgtttagcttgttcaaccaaaccttaggcaaaaaa
gcgatctcgaaattaattaacgagagctatcgccgtttaggtttaaaagaatctgtggtt
ttagctgaccaaattatgtacaccggctttgcttatgctgctcgttctggtgcctcagta
ggtatcgacgatatggtaattccggagcaaaaatacgcaatcattgaagcggctgaagcg
gaagtcgctgagatccaagagcaattcaacggcggtttagtaacagccggtgagcgttat
aacaaagtgatcgatatttgggctgctgcaaacgaacgtgttgcgaaagcaatgatggaa
aacctttcaacggaagaagtaatcaaccgtgaaggtaatccggaaaaacaagcctcattt
aacagtatctttatgatggcggactccggtgctcgtggttctgctgcacagattcgtcag
ttagcgggtatgcgtggcttgatggctcgtccggacggttcgattatcgaaaccccaatt
actgcaaacttccgtgaaggtttgaacgtattacagtactttatttcaacccacggtgca
cgtaaaggtcttgccgatacggcattaaaaacagcgaactccggttacttaacccgtcgt
ttagttgatgtggcacaagatttagttatcattgaagatgactgtggtacgcacgaaggt
atcgcgatgacaccacttatcgaaggtggtgatgtgaaagaagccctgcgtgatcgtgta
ttaggtcgtgtggtggcagaagatgtgttaaaaccgggtacagatgaagtattaattcca
cgcaacaccttattagatgaaaaatggtgtgatgtggtggatcgtgaatctgtggatgtg
atcaaagtacgttcggtagtaacttgtgatacagacttcggtgtgtgtgctaaatgttac
ggacgtgacttggctcgtggtcacttaatcaaccaaggtgaagcggtcggtgttattgcg
gcacaatctatcggtgagccgggtacacagttaacgatgcgtacgttccatatcggtggt
gcggcttctgcggcagcaaaagaatctagcatccaagtgaaaaacgcaggtacgattaaa
ttaaccaacgctaaatttgtaaccaacaaagaaggcaaaatcgtattaacttctcgtaat
actgaattaactgtcatcgacaccttcggtcgtaccaaagaaaactataaagtgccttat
ggtgcggtgctttctaaacacgacggtgcagaagtggctgtgggtgaagtggttgcgaac
tgggatccgcacacaatgccggtaatctcagaggtatcaggtcgtatccaatttagcgac
atcgtagatggcttaaccgttactcgccaaaccgatgaattaaccggtttatcatctatc
gtggtgcaagatgtgggtgaacgtgcaaccgcaggtaaagatttacgtccggcattacgc
ttagttgatagcaacggcaaagacatcttaattccgggtacagacgttgcagcacaatac
ttcttaccgggtaaagcaatcgtaaccttagacgatggtgcagaaattgaagtcggtgaa
gccttagcccgtattccacaagaatctgtggggacgaaagatattaccggtggtcttcca
cgcgtagcagacttattcgaagcccgtaaaccgaaagagccggcaatcttggcggaaatt
tcaggtattgtgtcgttcggtaaagaaaccaaaggtaaacgccgcttggtaattactccg
gcggaaggcgaagcgtttgaagagatgattccaaaatggcgtcagctcaacgtatttgaa
ggcgagatggtacaacgtggtgatgtgatatcagacggtgcagaaactccgcacgacatc
ttacgcttacgtggcgttcacgccgttaccgactacatcgtaaacgaagtgcaagaagtt
taccgcttacaaggggtaaaaattaacgacaagcacatcgaagtgattgttcgccaaatg
ttgcgtaaagctgtgatcaccaacgcttacgactctgaattcttagagggcgaacaagtg
gaagtggctcgtgtgaaaattgccaaccgcaaacgtgctgaagaaggcaaaccgttggta
gaatttgaacgtgaattgcttggtattaccaaagcatctcttgcaacagaaagctttatt
tctgcagcctcgttccaagaaaccactcgagtgcttaccgaagccgcagtggcaggtaaa
caagatgaattgcgtggcttaaaagagaacgtaatcgttggtcgcttaatcccggcaggt
accggttttgcttaccaccaagcacgagctaaaaaacgtgcccaactggaagcaggaatt
gcagttgtccctgaatttgaagcaccggcagctaaagccaattcattcgttaccgatgca
gacatcgaagctgaatttgaatttgttgcagacgatgcaacccaaagtttagcagcgttg
ttaaatgcgggtgaggaagagtaa
DBGET
integrated database retrieval system
