Mannheimia haemolytica D153: F382_11905
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Entry
F382_11905 CDS
T02746
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhae
Mannheimia haemolytica D153
Pathway
mhae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F382_11905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhae03019
]
F382_11905
03400 DNA repair and recombination proteins [BR:
mhae03400
]
F382_11905
Enzymes [BR:
mhae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F382_11905
Messenger RNA biogenesis [BR:
mhae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F382_11905
DNA repair and recombination proteins [BR:
mhae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F382_11905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Hanta_Gn-B
HEM4
Helicase_Sgs1
SKI
Motif
Other DBs
NCBI-ProteinID:
AGQ26610
LinkDB
All DBs
Position
complement(2335819..2337618)
Genome browser
AA seq
599 aa
AA seq
DB search
MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLDGIT
LVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQKALSGQLKLLYLSPEKVMT
QGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPNVPLMALTATADLTT
RSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQLIKFISKQQGKSGIVYCNSRKK
VEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIAFGMGINKSNVRFV
VHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPSDYAWLQKILLEEPESEQRNIKQHKL
QAIGDFAESQTCRRLVLLNYFGEHRQEQCKNCDICLDPPQQYDGLLDAQKVMSVIYRTGQ
IFGQHHIIAVLRGMNNLKIREHQHDQLSVYGIGKEQSQHYWQNVVRQLIHLGLIIQNIAN
HSALQLTESARPFLRGEKQLQLALPRLGISATAFVQKQASHRYDKDLFARLRFLRKQIAD
LENIPPYIVFNDATLQEMAEFLPTSKVEMLEINGVGERKFERFGQAFMSLIKEYQNNRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccgcaatttctgttttaaataatatttttggctatcaaaaattccgagac
gggcaagaagaagttatcaatgccgtgttggaaaatcgtgattgcctcgtgattatgaca
acaggcggtggcaaatccctttgctaccaagtgccggctttgtgcctagacggcatcact
ttggtgatttcgccgcttatttcgttgatgaaagaccaggtggatcaacttatcaccaac
ggcattgaagcagcttatcttaactccactcaaacgctcgaagagcagcaacttgtggaa
caaaaagccttatccggtcaattaaaattactctatctttcccctgaaaaggtaatgact
caaggctttttccactttatttcgctatgtaaaatcagctttattgcggttgatgaagcc
cattgtgtttcccaatgggggcacgatttccgccctgaatataccctgctaggtggctta
cgaaacactttcccgaatgtgccgttgatggcactcaccgccacggcagatctaacaacc
cgctccgatattctgcatcatttacgcttaaatagcccacatatctatttaggcagcttt
gatcgccccaatattcgctacaccgtgcaggaaaaatttaaaccgcttgaacagctcatt
aaattcatcagcaaacagcaaggcaaaagcggtattgtttactgcaacagtcgcaaaaaa
gtggaagaaatcaccgagaaactctcagcccgtaaaatcagcgtgatgggctatcacgcc
ggtatgagttttgaacagagagaacgagtgcagaatgcctttcagcgtgatgatattcaa
attgtggttgccactattgcgtttggtatggggatcaacaaatccaacgtacgttttgtg
gtacatttcgatttacctcgctctatcgaatcttactatcaagaaaccggacgagccggg
cgagatgatctcccttctgaagccgtgcttttttatgatcctagcgattatgcttggtta
caaaaaatattattggaagagccggaaagcgaacagagaaatattaaacagcataaatta
caggcaattggcgatttcgccgaatcacagacttgccgccgtttagtcttactcaactac
tttggggaacatcgccaagagcaatgcaaaaactgcgatatttgtttagatccaccgcaa
caatacgatggcttacttgatgcccaaaaagtgatgtcggtgatttaccgcaccggtcaa
attttcggtcagcaccatattattgcggtattgcgaggaatgaacaatctcaaaattcgt
gaacatcaacacgatcaactttccgtttatggtatcggaaaagaacaaagccaacattat
tggcaaaatgtggtgcggcaactgattcatttagggttgattattcaaaatattgctaac
cattccgctctgcaattaaccgaaagtgccagaccatttttgcgtggagaaaagcaactt
cagcttgcattgccacgtttaggtatatctgcgactgcatttgtgcaaaaacaagcaagt
catcgctatgacaaagacctattcgcacgcttacgttttttacgcaagcagatagctgac
ctcgaaaatattccaccttatatcgtctttaacgatgccaccttgcaagaaatggcagaa
tttctcccgacttcaaaagtggaaatgttagaaattaatggtgttggtgaacgaaaattt
gaacgatttgggcaagcatttatgagtttaatcaaagaatatcaaaataaccgaaaatag
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