Mycobacterium hainanense: ACEL92_06205
Help
Entry
ACEL92_06205 CDS
T11348
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mhaf Mycobacterium hainanense
Pathway
mhaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEL92_06205 (mfd)
Enzymes [BR:
mhaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEL92_06205 (mfd)
DNA repair and recombination proteins [BR:
mhaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACEL92_06205 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGI11118
LinkDB
All DBs
Position
1291474..1295145
Genome browser
AA seq
1223 aa
AA seq
DB search
MTAPGPARPEPPIAGLVELALTAPTFQQLIESATERPAELHLVGPASARLFVASALARLG
PLLVVTATGREADDLTAELRGVFGDAVAAFPSWETLPHERLSPGVDTVGTRLTVLRRLAH
PDDERLGPPLRVVVTAVRSLMQPMTPELGLVEPVTFKVGEEIAFSDVVARLVELAYTRVD
MVGRRGEFAVRGGILDVFPPTAEHPVRIEFWGDEVSEMRMFAVADQRSIPDIEVETVIAV
ACRELLLTDEVRERAAALAARHSGTEPAITGSVTDMLAKLAEGIAVDGMEALLPVLRPGE
HVLLTDQLAEGTPVLVCDPEKVRTRAADLIKTGSEFLEASWSVAALGTDAPVDVAQFGGS
GFAELDDVRAAAAKSGHPWWTLSQLSDESAVELDIRAAPSARGHQQDIDGIFAMLRAHVS
TGGYAAVVAPGAGTAHRVVERLADSDTPAAMLEPDAADTGLKPGIVSVLKGPLHDGLIIP
GHPANLVVITETDLTGSRVTAVEGKRLAAKRRNTVDPLALTAGDLVVHDQHGIGRFVEMT
ERTVGGARREYLVLEYASAKRGGGSDKLYVPMDSLDQLSRYVGGQAPALSKLGGSDWANT
KTKARRAVREIAGELVALYAKRQASPGHAFSPDTPWQAEMEDAFGFTETVDQLTAITEVK
ADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTDRM
AGFPVTVKGLSRFTDNSESRAVIEGLADGSVDVVIGTHRLLQTGVRWKDLGLVVVDEEQR
FGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPH
DDKQVAAALRRELLRDGQAFYVHNRVSSIDRAAAHVRELVPEARVVVAHGQMPEDRLERT
VQGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAY
FLYPPHAPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGVEQSGHVAGVGFD
LYVRLVGEAVEAYRAAADGQTVTTAEEPKDVRIDLPVDAHLPPDYIASDRLRLEAYRRLA
AASDDAAVDAVVEELVDRYGALPEPALRLVAVARLRLLCRAAGITEVSAPSAATVRLSPM
TLPDSAQVRLKRMYPSASYRATTSTVQVPIPRAGGVGAARIRDVELVQLVANLVTALQGK
PQTDIDITSASPAAMSGEERQAR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccggggcctgctcgcccagaacccccgatcgcggggctcgttgaattggcg
ctcaccgcgccgaccttccagcaactgatcgaaagcgcgaccgaacgaccggccgagctt
cacctggtgggtccagccagcgcacggcttttcgtggccagcgcgctggcgcggttgggg
cctttgctcgtggtcaccgcgacggggcgcgaagccgacgacctgaccgccgaattgcgc
ggcgtcttcggcgatgccgtcgcggcttttccgtcctgggagaccctgccgcacgagcga
ttgtcgccgggcgtcgacaccgtcggcacccggttgacggtgctgcgcaggctggcgcat
cccgacgacgagcgattgggcccgccgctacgcgtcgtggtgaccgccgtgcgctcgctg
atgcaaccgatgacgccggagctgggcctggtcgagccggtcacgttcaaggtcggcgag
gagatcgccttctccgacgtcgtcgcgcgactggtggagctggcctacacccgggtcgac
atggtggggcggcgcggcgagttcgcggtgcgcggcgggatcctcgacgtcttcccgccg
accgccgaacacccggtgcgcatcgagttctggggtgacgaggtcagcgagatgcggatg
ttcgccgtcgccgaccagcgctcgatacccgacatcgaggtcgaaacggtgatcgcggtc
gcctgccgggagttgctgctgaccgacgaggtgcgcgagcgggcggccgcgctcgccgcc
cggcactcggggaccgagcccgccatcaccggcagcgtcaccgacatgctggccaagctg
gccgagggcatcgccgtcgacggcatggaggcgctgctgccggtgctgcgccccggcgaa
cacgtgctgctgaccgatcaactggccgagggcacgccggtgctggtgtgtgaccccgag
aaggtgcgcactcgcgccgccgacctgatcaagacgggcagcgaattcctcgaggcgtcg
tggtcggtcgccgccctcggcaccgacgcgcccgtcgacgtggcgcaattcggcggatcg
gggttcgccgaactggacgacgtgcgcgccgcggcggcgaagtccggtcacccgtggtgg
acgctgagccagttgtccgacgagtcggcggtggagttggacattcgggcggcgccgtcg
gcccgcgggcaccagcaggacatcgacggcatcttcgcgatgctgcgcgcgcacgtctcg
accggtggctacgccgccgtcgtcgccccgggcgctgggaccgcccaccgggtcgtcgag
cggctcgccgactccgacacccccgccgccatgctggaaccggacgcggcggacaccggg
ctcaagccagggatcgtcagcgtgctcaagggtccgctccacgacggcctgataattccg
ggccatcccgccaacctggtcgtcatcaccgaaaccgatctgaccggcagccgggtcacc
gccgtcgagggcaagcggctggcggccaagcggcgcaacaccgtcgacccgctggcgctg
acggcaggtgacctggtggtgcacgaccagcacggcatcgggcggttcgtcgagatgacg
gagcgcacggtcggcggggcgcggcgcgagtatctggtgctggagtacgcctcggccaag
cgcgggggcgggtccgacaagctgtacgtcccgatggactcgcttgaccagctgtcccgc
tatgtcggcggccaggcgcccgcattgagcaagctcgggggcagcgactgggccaacacc
aagaccaaggcccgccgcgcggtgcgcgagatcgccggcgagctcgtcgcgctctacgcc
aagcggcaggccagccccggacacgcgttttcccccgacacgccgtggcaggccgagatg
gaggacgcgttcggcttcaccgagaccgtcgaccagctcaccgccatcaccgaggtcaag
gccgacatggaaaagccgatcccgatggaccgggtgatctgcggcgacgtcggctacggc
aagaccgagatcgcggtgcgggcggcgttcaaggcggtccaggacggcaagcaggtggcg
gtgctggtgcccacgacgctgctggccgaccagcacctgcagaccttcaccgaccggatg
gccggcttccccgtgaccgtcaaggggctctcgcgattcacagacaactccgagtcccgc
gccgtgatcgagggactggccgacggctcggtggacgtcgtgatcggcacgcaccggctg
ctgcagaccggggtgcgctggaaggacctggggctggtcgtcgtcgacgaggagcagcgg
ttcggcgtcgagcacaaggagcacatcaagtcgctgcggacccacgtcgacgtgttgacc
atgagcgccacgcccatcccgcggacgctggagatgagcctggccgggatccgcgagatg
tcgaccatcctgacgccgcccgaagagcgttatcccgtgctgacctacgtcggcccgcac
gacgacaagcaggtcgcggccgccctgcggcgcgagctgctgcgcgacgggcaggcgttc
tacgtgcacaaccgggtcagctcgatcgaccgcgccgctgcgcacgttcgcgagctggtc
ccagaggcgcgggtggtcgtcgcgcacgggcagatgcccgaggaccggctggaacgcacc
gtgcaggggttctggaaccgcgagtacgacatcctggtctgcacgacgatcgtggagacc
ggcctggacatctccaacgccaacacgttgatcgtcgagcgcgccgacaccttcgggctc
tcccagctgcaccagctgcgcggccgggttggccgcagccgcgagcgcgggtacgcctac
ttcctgtatccgccgcacgcgccgctcaccgagacggcctacgaccggctggcgaccatc
gcgcagaacaacgagctgggcgccggcatggcggtcgcgctcaaggacctcgagatccgc
ggcgccggtaacgtgctgggcgtcgagcagtccgggcacgtcgccggggtcgggttcgac
ctgtacgtgcggctggtgggcgaggccgtggaggcctaccgcgcggccgccgacgggcag
acggtgaccaccgccgaggagcccaaggacgtgcggatcgacctgccggtggacgcgcac
ctgccgccggactacatcgccagcgaccggttgcggctggaggcctaccggcggctggcg
gcggcttccgacgacgcggccgtcgacgccgtcgtggaggaactcgtcgaccgctacggc
gcgctgccggaaccggccctgcgcctggtggcggtggcgcggttgcggctgctgtgccgc
gccgccggcatcaccgaggtgtccgccccgtcggcggccaccgtgcggctgtcgccgatg
acgctgcccgattcggctcaggtgcggctcaagcggatgtatccgtcggcgagctaccgc
gccacgacctcgaccgtgcaggttcccatcccgcgggccggcggtgtgggggcggcacgc
atccgcgacgtcgagctggtgcagctggtggccaatctggtgacggcgctgcaaggaaaa
ccccagactgacattgatataacgagtgcgtcacctgcagcgatgtccggtgaggagcga
caagcgcgatga
DBGET
integrated database retrieval system
