KEGG   Mycobacterium hainanense: ACEL92_17805
Entry
ACEL92_17805      CDS       T11348                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mhaf  Mycobacterium hainanense
Pathway
mhaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACEL92_17805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhaf03019]
    ACEL92_17805
Messenger RNA biogenesis [BR:mhaf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACEL92_17805
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: XGI08312
LinkDB
Position
complement(3847010..3848686)
AA seq 558 aa
MDVDLTPPGPLTTGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVMFPTHDEPGVDLI
LPDLRHISDRLDDIEALVLTHAHEDHIGGIPFLLRLRPDIPVVGSKFTLALVAAKCREHR
LKPVFVEVTEGQRSTHGVFECEYFAVNHSIPDALAIAVHTGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEIPGVGPSESEVGPTLHRLIRGAEGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGFLRVADSDVIDIGAAEMMPPERV
VLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLASSLIPGNEEAVYGVIDALAKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPEESI
LLAENGVSVDLVAGTASIAGAVPVGKMFVDGLISGDVGDITLGERLILSSGFIAVTVVVQ
RGTGRPVAAPHLYSRGFSEDPKALEPAGRRVEAELELLAADNITDPGRIAQAVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtggatgtagacctcacccctcctggtcccttgaccactggtgggctgcgggtcaccgcg
ctgggcggcatcagcgaaatcggccgcaacatgacggttttcgagcacctcggcaggctg
ctgatcatcgactgcggggtgatgttccccacccacgacgagcccggggtggacctgatc
ctgccggacctgcgccatatctccgaccggctcgacgacatcgaggcgctggtgctgacc
cacgcgcacgaggatcacatcggcggcatcccgttcctgctcaggctgcgccccgacatc
ccggtcgtcgggtcgaagttcaccctggcgctggtggcggcgaaatgccgtgagcaccgg
ctcaagccggtgttcgtcgaggtgaccgaggggcaacgcagcacgcacggcgtcttcgag
tgcgaatacttcgccgtcaatcactccatcccggacgcgctcgccatcgccgtgcacacc
ggcgcgggaaccgtcttgcacaccggggacatcaagctcgaccagcttcccctcgacggc
cggccgaccgatctgcccggcatgtcccggctcggcgacgccggggtggacctgttcctg
tgcgactcgaccaattccgagatcccgggcgtggggccgtcggaaagcgaagtggggccg
acgctgcaccgcctgatccggggcgccgagggccgcgtcatcgtcgcgtgctttgcctcc
aacgtggaccgggtgcagcagatcatcgacgccgcggtcgctttgggccggcgcgtgtcg
ttcgtcgggcgctcgatggtgcgcaacatgggcatcgcccgcgagctcgggttcctgcgg
gtggccgattccgacgtgatcgacatcggcgcggccgagatgatgccgcccgagcgggtc
gtgctgatcaccaccggcacccagggcgagcccatgtcggcgctgtcgcggatgtcgcgc
ggcgagcatcgcagcatcacgctgacggcgggcgacctgatcgtgctggcttcgtcgctg
atccccggcaacgaggaggcggtctacggcgtgatcgacgcgctcgccaagatcggggcc
cgcgtcgtcaccaacgcccaagcccgcgtgcatgtttcgggccacgcgtacgccggtgag
ctgttgttcctctacaacggcgtgcggccgcgcaacgtcatgccggtgcacggcacctgg
cggatgctgcgcgccaacgccaagctggcggccagcaccggggtgccggaggagtcgatc
ctgttggccgagaacggcgtcagcgtcgacctggtcgccggcacggcgtcgatcgccggg
gcggtgccggtgggcaagatgttcgtcgacgggctgatcagcggcgacgtcggcgacatc
acgctcggcgaacggctgatcctgtcatcgggtttcatcgcggtgacggtggtcgtccag
cgcggcaccgggcggccggtggcggcgccgcacctgtattcacgcgggttctcggaggat
cccaaggcgctggaacccgccgggcgccgggtcgaggcggagctggaactgctggccgcc
gacaacatcaccgaccccggccgcatcgcccaggccgtgcgccgcaccgtcggcaagtgg
gtcggcgagacctaccggcgacagccgatgatcgtgccgacggtcatcgaggtctga

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