Microbispora hainanensis: OHB01_06540
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Entry
OHB01_06540 CDS
T09710
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mhai
Microbispora hainanensis
Pathway
mhai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OHB01_06540
09124 Replication and repair
03420 Nucleotide excision repair
OHB01_06540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhai03021
]
OHB01_06540
03400 DNA repair and recombination proteins [BR:
mhai03400
]
OHB01_06540
Enzymes [BR:
mhai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OHB01_06540
Transcription machinery [BR:
mhai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OHB01_06540
DNA repair and recombination proteins [BR:
mhai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OHB01_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ApoA-II
Motif
Other DBs
NCBI-ProteinID:
WUP84185
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All DBs
Position
1432140..1433795
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AA seq
551 aa
AA seq
DB search
MSDGPLIVQSDKTLLLEVDHPRADECRKAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVIDALIGFSRYPVPHALLVDVAETMARYGRLRLEKHPIHGLVLTSTDRAVLEEVL
RSKKIQPLVGERFGADIVAVHPSERGNIKQTLLKLGWPAEDLAGYVDGEHHPIDLREDGW
SLRPYQKEAADAFWHGGSGVVVLPCGAGKTIVGAAAMAHARATTLILVTNTVSAHQWKQE
LLRRTSLTEDEIGEYTGTKKEIRPVTIATYQVMTTRRQGTYRHLELFDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRIGLTATLVREDGREGDVFSLIGPKRYDAPWKEMENQGYIAP
AECVEVRVTLSDDERLAYAMAENDERYRFCSTTPAKTRVTEALVRRHADEQVLVIGQYID
QLDELGEHLNAPVIKGETKVKERERLFQAFRDKEIRVLVVSKVANFSIDLPEASVAIQVS
GTFGSRQEEAQRLGRVLRPKADGGGARFYSVVSRDTVDQEFAAHRQRFLAEQGYAYHIID
ADDVGEEDPAR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgggccgctgatcgtccagtcggacaagacgctgctgctggaggtcgaccac
ccgagggcggacgagtgccggaaggccatcgccccgttcgccgaactcgagcgcgcgccc
gagcacgtccacacctaccgggtcaccccgctcgcgctgtggaacgcccgggccgccggg
cacgacgccgagcaggtgatcgacgcgctgatcggcttcagccgctatccggtgccgcac
gcgctgctcgtggacgtcgccgagaccatggcgcggtacggcaggctgcggctggagaag
caccccatccacggcctggtgctcaccagcaccgaccgggccgtgctggaggaggtgctg
cgctccaagaagatccagccactggtcggggagcgcttcggagccgacatcgtggccgtg
cacccctccgagcgcggcaacatcaagcagacgctgctcaagctcggctggccggccgag
gacctggccggatacgtcgacggcgagcaccaccccatcgacctgcgcgaggacggctgg
tcgctgcggccctaccagaaggaggcggccgacgcgttctggcacggcggctccggggtc
gtggtgctgccgtgtggcgcgggcaagacgatcgtcggcgcggcggccatggcgcacgcc
cgcgcgaccacgctgatcctcgtcaccaacacggtctccgcccaccagtggaagcaggag
ctgctcaggcgcacctcgctgaccgaggacgagatcggcgaatacaccggcaccaagaag
gagatccggccggtcacgatcgccacctaccaggtcatgacgacccggcggcagggcacc
taccggcaccttgagctgttcgacgcccgcgactgggggctcgtcgtctacgacgaggtc
cacctgctgcccgcgccgatcttccggatgaccgccgacctccaggcccgccggcgcatc
ggcctcaccgccacgctcgtacgcgaggacggccgggagggcgacgtcttctcgctcatc
gggcccaagcgctacgacgcgccctggaaggagatggagaaccagggctacatcgccccc
gccgagtgcgtcgaggtgcgggtgacgctcagcgacgacgagcggctggcctacgcgatg
gccgagaacgacgagcgctaccggttctgctcgaccacacccgccaagacgcgggtgacc
gaggcgctggtgcggcggcacgccgacgagcaggtgctggtcatcgggcagtacatcgac
cagctcgacgagctgggcgagcacctgaacgcgccggtcatcaagggcgagaccaaggtc
aaggagcgcgagcgcctgttccaggcgttccgcgacaaggagatccgggtgctggtggtc
tcgaaggtcgccaacttctccatcgacctgcccgaggcgtccgtggcgatccaggtctcc
ggcacgttcggctcacgccaggaggaggcgcagcggctcggccgggtgctgcgccccaag
gccgacggcggcggcgcacggttctactcggtggtcagccgcgacacggtcgaccaggag
ttcgccgcgcaccggcagcggttcctggccgagcagggctacgcgtaccacatcatcgac
gccgacgacgtgggcgaagaagaccccgcacgctga
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