Microbispora hainanensis: OHB01_19830
Help
Entry
OHB01_19830 CDS
T09710
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhai
Microbispora hainanensis
Pathway
mhai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OHB01_19830 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhai03021
]
OHB01_19830 (rho)
03019 Messenger RNA biogenesis [BR:
mhai03019
]
OHB01_19830 (rho)
Transcription machinery [BR:
mhai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OHB01_19830 (rho)
Messenger RNA biogenesis [BR:
mhai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OHB01_19830 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WUP86670
LinkDB
All DBs
Position
4220581..4222542
Genome browser
AA seq
653 aa
AA seq
DB search
MSDTTELLSDGQAAGDTPTSAPARPRRRSGTGLAGMVLPELQALATSLGITGTGRMRKSQ
LIAAIQEKQGGSGESAPEPKAAAEAPAAAERPARGRRERSRAAQASAPEPAPAAEPVAAA
REERPVVEAASAVAAEAAQNGAATVAEPQAEAAAQPETRSERPERGDRRERRTRGERGER
GRERDGRGDQRGDQRAADTGDGGQGRRDQQGRGDNRGDNRSDGRDSRGDSRTDGRADGKG
DQQGEDGRGRRGRFRERGRRGRDRFEGNEPVISEDDVLIPIAGILDILDNYAFVRTSGYL
PGANDVYVSLAQIRRNGLRKGDVITGAVRQPRDGERREKFNALVRLDTVNGMDPEQARQR
PDFNKLTPLYPQERLRLETEPNVLTTRIIDLVSPIGKGQRGLIVSPPKAGKTMVLQAIAN
AITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIHSTFDRPAEDHTTVAELAIERAKRL
VELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFFGAARNIENGGSL
TILATALVETGSKMDEVIFEEFKGTGNMELKLNRSLADKRIFPAVDVDASGTRKEEILMA
KEELSIVWKLRRVLHALDMQQALELLLEKMKETKSNAEFLLQVQKTTVSNDRD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgaactcctctccgacggccaggccgccggcgacacccccacttcc
gccccggcccgtccgcgacgtcgctccggcaccggcctggctggcatggtgctccccgag
cttcaggccctggcgaccagcctcggcatcacggggaccggacggatgcgcaagagccag
ctcatcgcggccatccaggagaagcagggcggatcgggagagtccgcgcccgagccgaag
gccgccgcagaagcgcccgccgccgctgagcgccccgcccgtggccgccgggaacgttcc
cgcgccgcccaggcttccgcgcccgagccggcgccggccgccgagcccgtcgccgcggct
cgtgaggagcgtcccgtggtcgaggctgcgtccgccgtggccgccgaggccgcgcagaac
ggcgccgccaccgtcgccgagccgcaggccgaggccgccgcccagccggagacccgcagc
gagcggcccgagcgcggcgaccgccgcgagcgccgcacgcgcggtgagcgtggcgagcgg
ggccgtgagcgcgacggccgcggtgaccagcgcggtgaccagcgcgccgccgacacggga
gacggcggccagggccgtcgtgaccagcagggccgtggcgacaaccgcggcgacaaccgc
tccgacgggcgtgacagccgcggcgacagccgtacggacggccgcgccgacggcaagggc
gaccagcagggcgaggacgggcgtgggcgccgtggccgcttccgggagcgcggccgccgc
gggcgcgaccgtttcgagggcaacgagccggtcatcagcgaggacgacgtcctgatcccg
atcgccggcatcctggacatcctcgacaactacgccttcgtgcgcaccagcggctacctt
ccgggcgcgaacgacgtctacgtctcgctcgcccagatccgccgcaacggcctgcgcaag
ggcgacgtcatcaccggcgccgtccggcagccgagggacggcgagcggcgcgagaagttc
aacgcgctcgtccgcctcgacaccgtcaacggcatggacccggagcaggcccgtcagcgg
cccgacttcaacaagctcacgccgctctacccgcaggagcgcctgcgcctggagaccgag
cccaacgtcctgaccacgcggatcatcgacctcgtctcgccgatcggcaagggccagcgc
ggcctcatcgtgtcgcctcccaaggccggcaagacgatggtgctccaggcgatcgccaac
gcgatcacgcgcaacaaccccgagtgccacctgatggtcgtcctcgtggacgagcgtccg
gaagaggtcaccgacatgcagcggtcggtcaagggcgaggtcatccactcgaccttcgac
cgcccggccgaggaccacaccaccgtcgccgagctcgccatcgagcgggccaagcgcctg
gtggagctgggccacgacgtcgtcgtcctgctcgactcgatcacccgtctcggccgcgcg
tacaacctcgcggcgccggcgagcggccgcatcctgtccggtggtgtcgactcgaccgcg
ctctacccgccgaagcggttcttcggcgccgcccgcaacatcgagaacggcggctcgctg
acgatcctcgccacggcgctggtcgagaccggctccaagatggacgaggtcatcttcgag
gagttcaagggcaccggcaacatggagctcaagctcaaccggtcgctcgcggacaagcgc
atcttcccggcggtggacgtggacgcgtccggcacccgcaaggaggagatcctcatggcg
aaggaggagctgtcgatcgtctggaagctccgccgcgtcctccacgccctcgacatgcag
caggcgctggagctccttctcgagaagatgaaggagaccaagtccaacgccgagttcctg
ctccaggtgcagaagaccacggtcagcaacgaccgcgactga
DBGET
integrated database retrieval system
