Microbispora hainanensis: OHB01_21640
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Entry
OHB01_21640 CDS
T09710
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mhai
Microbispora hainanensis
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mhai03009
]
OHB01_21640 (rimO)
Enzymes [BR:
mhai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OHB01_21640 (rimO)
Ribosome biogenesis [BR:
mhai03009
]
Prokaryotic type
ribosomal protein modification factors
OHB01_21640 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
OmpA
Motif
Other DBs
NCBI-ProteinID:
WUP79590
LinkDB
All DBs
Position
4613318..4614730
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AA seq
470 aa
AA seq
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MSSRRTVSLITLGCARNEVDSEELAARLEAAGWHTDDDDPDVVVVNTCGFIDSAKKDSID
TLLAAADSGAKVVAAGCMAERYGAQLADALPEATVISFDDYAEIGERLDDVIAGRPLVPH
SPRDRRTLLPITPVERSAAHAHIPGHAQADPLPEGVAPASGPRMLRKRLGSGPVASLKLA
SGCDRRCTFCAIPAFRGSYVSRRPEDLLAEAAWLAGQGVKELVLVSENSTSYGKDLGDLR
ALEKLLPLLAATEGIERVRVSYLQPAELRPGLLDVIASTEGVAPYFDLSFQHASGTVLRR
MRRFGDPKRFLDLLAQIRDRAPEAGIRSNFIVGFPGETQEEFDELVAFLEKARLDVIGVF
GYSDEEGTDAYGFEGKLDQDVIDERVAMLTELAEELTAQRAEERIGDELQVLIEEDLGDG
GYEGRAAHQGPEVDGAVTVQGIGLVPGQIVQAVAVDSEGVDLIARIKAGT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcgccgaaccgtatcgctgatcacgctgggctgcgcccgcaacgaggtcgac
tccgaggagctggccgcgcggctggaggccgccggctggcacaccgatgacgacgatccc
gacgtcgtcgtcgtcaacacgtgcggcttcatcgattcggcgaagaaggactccatcgac
accctgctcgccgcggccgactcgggcgcgaaggtggtggcggcgggctgcatggccgaa
cggtacggcgcgcagctcgccgacgccctgcccgaggcgaccgtcatctccttcgacgac
tacgccgagatcggggagcgtctcgacgacgtcatcgcgggcaggccgctggtcccgcac
tccccgcgggaccgccgcacgctcctgccgatcacgccggtggagcgctcggccgcccac
gcccacattcccggtcacgcccaggcggacccgctgccggagggcgtcgcccccgccagc
ggcccgcgcatgctgcgcaagcggctcggctcggggccggtggcgtcgctgaagctcgcg
tcgggctgcgaccggcgctgcacgttctgcgcgatcccggccttccgcggctcgtacgtc
tcgcgccgcccggaggacctgctcgccgaggccgcctggctggccgggcagggcgtcaag
gagctcgtgctggtcagcgagaactccacgtcgtacggcaaggacctgggcgacctgcgc
gcgctggagaagctgctgcccctcctggccgcgaccgagggcatcgagcgggtgcgggtc
agctacctgcagcccgccgagctgcggcccgggctgctcgacgtgatcgcctcgacggag
ggggtcgcgccctacttcgacctgtccttccagcacgccagcgggaccgtgctgcggcgg
atgcggcgcttcggcgaccccaagcggttcctcgacctgctcgcgcagatccgcgaccgt
gcgcccgaggcgggcatcaggtccaacttcatcgtggggttcccgggggagacccaggag
gagttcgacgagctggtggccttcctcgaaaaggccaggctcgacgtcatcggtgtcttc
ggctactccgacgaggagggcaccgacgcgtacggcttcgagggcaagctcgaccaggac
gtgatcgacgagcgggtcgcgatgctgaccgagctggccgaggagctgaccgcccagcgg
gccgaggaacgcatcggcgacgagctgcaggttctgatcgaggaggacctcggcgacggc
ggatacgagggccgtgcggcgcatcagggtcccgaggtggacggcgccgtcacggtgcag
gggatcggcctggtccccggccagatcgtccaagcggtcgccgtcgactccgagggggtc
gacctcatcgcccggatcaaggcaggcacatga
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