Microbispora hainanensis: OHB01_21795
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Entry
OHB01_21795 CDS
T09710
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mhai
Microbispora hainanensis
Pathway
mhai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OHB01_21795 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhai03019
]
OHB01_21795 (rny)
Messenger RNA biogenesis [BR:
mhai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OHB01_21795 (rny)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF4148
Motif
Other DBs
NCBI-ProteinID:
WUP79619
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Position
4649443..4651065
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AA seq
540 aa
AA seq
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MDTIVIVLAVAVVLLALVMIAALVIVMRRTGVVAPSGPSPEQLAEVKAEVNEELEQARRE
AEEIRTKAERDAGEILKKSETLAESAALMRKEVEEEARILKTELKELRSDLERRENRLAE
REQRLDEEARRQTERARKLAETETELADRREELERVAERRQEILERVAGLTAEQAKAELV
KEIENQAKREAALIVREIESEARKEGEKRACKIVTLAVQRVATEQTAESVVSVLHLPGDE
MKGRIIGREGRNIRAFESTTGVNLIIDDTPEAVLLSCFDPVRRETARLTLEKLVLDGRIH
PQRIEEAYERSKAEVRDLCVRAGEDALVELGITEMHPELVTLLGQLRYRTSYGQNVLKHL
IESAHIAGIMASELGLDRDLVKRCALLHDIGKALTHEVEGSHAMIGAEIARRYGEHEDVV
HAIEAHHNEVEVKTVEAVLTQAADAISGSRPGARRESLEAYVKRLERLEEIAQSYDGVDK
VFAMQAGREIRVMVRPDNVDDIQAQVIARDVAKQVEEELTYPGQIRITVVRESRATEFAR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatcgtgatcgttcttgcggttgcggtagtgctgctggctctcgtgatgatc
gccgccctcgtcatagtcatgcgccgcaccggcgtcgtcgcaccgtccggcccctcgccc
gagcagctcgccgaggtgaaggccgaggtcaacgaggaactcgaacaggccagacgcgag
gccgaggagatccgcacgaaggcggagcgtgacgcgggggagatcctcaagaagtcggag
acactcgccgaaagcgcagcgctgatgcgcaaggaggtcgaggaggaggcgcggatcctc
aagacggagctcaaggaactgcgctccgacctcgagcgtcgcgagaaccggcttgctgag
cgtgagcagcggcttgacgaggaggcgcgcagacagacggagcgggcccgcaagctggcc
gagaccgagaccgagctggccgaccgccgtgaggagctggagcgggtggccgagcggcgg
caggagatcctggagcgggtcgccggcctgacggccgagcaggccaaggcggagctggtc
aaggagatcgagaaccaggccaagcgcgaggccgcgctgatcgtccgggagatcgagagc
gaggcccggaaggagggcgagaagcgcgcctgcaagatcgtgacactggcggtgcagcgg
gtcgccaccgagcagacggccgagtcggtggtgagcgtcctccacctgcccggcgacgag
atgaagggccgcatcatcggccgcgagggccgcaacatcagggcgttcgagtccaccacc
ggggtcaatctgatcatcgacgacacgccggaggcggtgctgctgtcgtgtttcgacccg
gtccggcgggagacggccaggctgacgctggagaagctggtgctcgacggccggatccac
ccccagcgcatcgaggaggcgtacgagcgcagcaaggccgaggtgcgggacctgtgcgtg
cgcgcgggagaggacgccctggtcgagctgggcatcaccgagatgcaccccgagctggtc
acgctgctgggccagctccgctatcgcacctcctacggccagaacgtgctcaagcacctg
atcgagtcggcgcacatcgccggaatcatggcctccgagctggggctcgaccgtgacctc
gtcaagcggtgcgcgcttctgcacgacatcggcaaggcgctcacccacgaggtcgagggc
agccacgcgatgatcggcgcggagatcgcccgccggtacggcgaacacgaggacgtcgtc
cacgccatcgaggcgcaccacaacgaggttgaggtcaagaccgtcgaggcggtcctcacc
caggccgcggacgcgatcagcggcagccgccccggtgcccggcgcgagtccctggaggcg
tacgtcaagcggctggagcgtctggaggagatcgcccagtcgtacgacggtgtggacaag
gtcttcgccatgcaggccggccgggagatccgggtgatggtccggcccgacaacgtggac
gacatccaggcccaggtcatcgccagggacgtcgccaagcaggtcgaagaggagctgacc
taccccggccagatccgcatcaccgtggtccgcgagtcccgtgccacggagttcgcccgg
taa
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