Microbispora hainanensis: OHB01_27455
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Entry
OHB01_27455 CDS
T09710
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhai
Microbispora hainanensis
Pathway
mhai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OHB01_27455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhai03019
]
OHB01_27455
03009 Ribosome biogenesis [BR:
mhai03009
]
OHB01_27455
Enzymes [BR:
mhai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OHB01_27455
Messenger RNA biogenesis [BR:
mhai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OHB01_27455
Ribosome biogenesis [BR:
mhai03009
]
Prokaryotic type
rRNA helicases
OHB01_27455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
WUP87050
LinkDB
All DBs
Position
5933759..5935480
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AA seq
573 aa
AA seq
DB search
MVENETDEGPGFADLALGPELLKALTGLGYEEPTPIQREAIPPLLEGRDLLGQAATGTGK
TAAFALPMLQRLHAGLHPAAMENGGGEPAGLVLVPTRELAVQVSEAMHRYGRDLGTRVLP
IYGGQPIGRQLRALERGVDVVVATPGRALDHIGRGTLPLKGLRMVVLDEADEMLDMGFAD
DIEAILQDTPEDRQTVLFSATMPPRIDGIARRHLREPVRIRIEREQPAAGEAPLIRQSAY
IVTRAYKPAALGRVLDVEAPTAAIVFCRTREEVDSLTETMNGRGYRAEALHGGMGQEQRD
RVMGRLRSGTADLLVATDVAARGLDIEQLTHVINYDVPSAPESYVHRIGRVGRAGREGVA
ITLAEPREHRMLKTIERVTRSKITVEKVPTVADLRARRLELTRAALQESLMEDGDLDRFR
VVVETLADEFDLVDIALAAVKLAHESTGAAADEEEIPEVTPRPQRAERGGPRDDRSGRDE
RRGRRGGGAMSRVFVGAGRSAGVRPQDIVGAITGETRVSGREIGAIEIADRFTLVEIPDG
AVDEVVTALRRTTIKGRKPIVRRDRDGAPRGRR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagaacgagaccgacgaaggacccggattcgccgatctggcgctgggccccgag
ctcctgaaggccttgaccggtctcggttacgaggagcccacgcccatccagcgggaggcc
atcccgccgcttctggagggccgcgacctcctcgggcaggccgcgaccggcacgggcaag
accgccgcgttcgccctgcccatgctccagcggctgcacgccggcctccacccggcggcc
atggagaacggcggcggcgagcccgcggggctggtgctggtgcccacccgcgagctggcc
gtacaggtgtcggaggccatgcaccgctacggccgcgacctcggcacgcgggtgctgccc
atctacggcggccagccgatcgggcggcagctgcgggcgctggagcgcggcgtggacgtc
gtcgtcgccaccccgggccgggcgctcgaccacatcggcaggggcaccctgccgctcaag
ggcctgcgcatggtcgtcctcgacgaggccgacgagatgctcgacatgggcttcgccgac
gacatcgaggcgatcctccaggacaccccggaggaccggcagaccgtgctgttctccgcg
accatgccgccgcgcatcgacggcatcgcccgccgtcacctgcgcgagccggtgcggatc
aggatcgagcgggagcagcccgccgccggtgaggccccgctgatccggcagagcgcctac
atcgtgacgcgggcgtacaagccggccgcgctcggccgcgtgctcgacgtggaggccccc
accgcggcgatcgtcttctgccgcacccgtgaggaggtcgacagcctcaccgagaccatg
aacggccgcggctaccgcgccgaggccctgcacggcggcatgggccaggagcagcgcgac
cgcgtcatgggccggctgcgcagcgggacggccgacctgctcgtcgcgaccgacgtggcc
gcgcgcggcctcgacatcgagcagctcacccacgtcatcaactacgacgtgccgtccgcg
cccgagtcgtacgtgcaccgcatcggccgggtgggccgggccgggcgcgagggcgtcgcg
atcacgctcgccgagccgcgtgagcaccgcatgctcaagaccatcgagcgcgtcacccgc
agcaagatcacggtcgagaaggtgccgacggtggccgacctgcgcgcccggcggctggag
ctgaccagggccgccctgcaggagagcctcatggaggacggcgacctcgaccgcttccgc
gtggtggtcgagacgctcgccgacgagttcgacctggtcgacatcgcgctcgcggcggtc
aagctcgcccacgagtcgaccggcgccgccgcggacgaggaggagatccccgaggtcacg
ccgcgcccgcagcgggccgaacgcggcggaccgcgcgacgacaggtccggccgcgacgag
cggcgcggacggcgcgggggcggcgcgatgagccgcgtcttcgtcggcgcgggccgcagc
gcgggcgtgcgtccccaggacatcgtcggcgcgatcaccggggagacccgggtcagcggg
cgcgagatcggggcgatcgagatcgccgaccggttcaccctggtcgagatcccggacggc
gcggtggacgaggtggtcacggcgctgcgccgcacgacgatcaagggcaggaagccgatc
gtgcgcagggaccgcgacggcgccccccgcggccgccgctga
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