Microbispora hainanensis: OHB01_28270
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Entry
OHB01_28270 CDS
T09710
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
mhai
Microbispora hainanensis
Pathway
mhai02024
Quorum sensing
mhai03060
Protein export
mhai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OHB01_28270 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OHB01_28270 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OHB01_28270 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mhai02044
]
OHB01_28270 (secD)
Secretion system [BR:
mhai02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OHB01_28270 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WUP80830
LinkDB
All DBs
Position
complement(6120232..6122478)
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AA seq
748 aa
AA seq
DB search
MSRAPLWRAVAALAVIAISLLLALTIAPRLGLDLRGGTQLVFETRDSPTVKADADAADRA
LDVLRRRADALGVVDPTLVRSGEKRIIVELPGVLDPREAAAVIGKTAQLNFHPVLSAAEE
GDTDAIADESGRKLKLGPVALSGAGVADAAARSDPQAGPGWFVTIDFKEPGPWRKLTGEA
ACAPLGDHKRRVAIVLDNEIISSPQVDESIACGVGIGGGTTQITGSFTPQEAQNLAVLIK
GGSLPVPLELVEQRTVGPTLGADAIAASAKAGVAGVILTAVFIGMVYRLVGVLAAVALAC
YGLISYAGLVAMGATLTLPGLAGFVLAIGMAVDANVLVFERAREEFGDAPRRGLKAALDR
GFKNAWSAIADSGITTLLAAGLLFWLASGPVKGFGVTLAIGVLASLVSAMLITRVLTAAL
IGRIGPRASGIGSIGRVRTWLTRRDPDLMRRGRLWLAVAAGLLVVAGAGLVTRGLNYGVE
FTGGRIVEFGTSRPVDVAAARQAVADAGFPSAVVQRSDDALSVRTGQISADDVVRMEEAL
DRRVGEVAKQRDELIGPSLGEELRRNAIIALAVALAAQLVYLAFRFRWTFGTAAVAALFV
DAAVVVGAFAWMGRPIDGVFLAAMLTIIGYSVNDKVVLFDRVRELWPVRRREPFGRVVNA
AILQTAPRTVNTGLGALFILAALAVFGGDSLRDFAVALLIGIVAGTLSSSFVAGPVAIAL
ERRSGQAPPAPAAPRVRPVRRDDSGAVV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgcgcccctgtggcgcgcggtggcggcgctcgccgtcatcgcgatctcactg
ctgctcgctctcaccattgcgccgcgcctcggcctcgacctgcgcggcggcacccagctc
gtcttcgagacgagagactctcccacggtcaaggcggacgccgacgccgccgaccgtgcc
ctcgacgtgctccggcgccgggcggacgccctcggagtcgtcgatcccaccctggtccgc
tccggcgagaagcggatcatcgtcgaactgcccggcgtgctcgacccgcgcgaggccgcc
gcggtcatcggcaagaccgcccagctcaacttccatccggtgctgagcgccgccgaggag
ggtgacacggacgcgatcgcggacgagagcggccggaagctgaagctcgggccggtcgcg
ctcagcggggccggtgtcgccgacgccgccgcgcgcagcgacccccaggcggggccgggc
tggttcgtcacgatcgatttcaaggaacccggtccctggcggaagctgaccggcgaggcg
gcctgcgcgccgctcggcgaccacaagcgccgcgtcgccatcgtcctcgacaacgagatc
atctcctcgccgcaggtggacgagtcgatcgcctgcggggtggggatcggcggcggcacc
acgcagatcaccgggtcgttcaccccgcaggaggcgcagaacctcgcggtgctgatcaag
ggcggctcgcttccggtgccgcttgagctggtcgagcagcgtacggtcggcccgaccctc
ggcgccgacgccatcgcggcgagcgccaaggccggcgtcgccggggtgatcctgaccgcg
gtgttcatcggcatggtctaccggctggtgggcgtgctggccgcggtcgcgctcgcctgc
tacggcctgatctcgtacgccgggctcgtggccatgggggccacgctcacgctgcccggc
ctggccgggttcgtcctggcgatcggcatggcggtggacgccaacgtgctggtcttcgaa
cgggccagagaggagttcggcgacgcgccccggcggggcctcaaggcggcactcgaccgg
ggcttcaagaacgcctggagcgcgatcgccgactccggcatcaccaccctgctcgccgcc
gggctgctgttctggctggcctcggggccggtgaagggcttcggcgtgacgctggccatc
ggcgtgctggcctcgttggtctcggccatgctgatcacccgggtgctcaccgccgcgctg
atcggcaggatcggcccgcgggcgtccggcatcggctcgatcggccgggtcaggacgtgg
ctgacgcggcgcgacccggacctgatgcggcgcgggcggctgtggctcgccgtcgcggcc
gggctgctcgtggtcgcgggcgcgggcctggtcacccgcggcctcaactacggcgtcgag
ttcaccggcggccggatcgtggagttcggcacgagcaggcccgtggacgtcgcggcggcc
aggcaggcggtggcggacgccgggttcccctcggccgtcgtgcagcggtcggacgacgcg
ctctcggtgcgcaccgggcagatcagcgccgacgacgtggtccgcatggaggaggcgctc
gaccggcgcgtgggcgaggtcgccaagcagcgcgacgagctgatcgggccgagcctgggc
gaggagctgcgccgcaacgcgatcatcgcgctcgctgtcgcgctcgccgcacagctcgtc
tatctggcgttccggttccggtggacgttcggcacggcggccgtggcggcgctgttcgtg
gacgcggccgtcgtcgtcggcgcgttcgcctggatgggcaggccgatcgacggggtgttc
ctggcggcgatgctcacgatcatcggttattcggtcaacgacaaggtcgtgctgttcgac
cgggtgcgcgagctgtggccggtgcgccgccgcgagccgttcggccgggtggtgaacgcc
gcgatcctgcagaccgcgccgcgcacggtcaacaccgggctcggggcgctgttcatcctg
gcggcgcttgcggtgttcggcggcgactcgctgcgcgacttcgccgtcgccctcctgatc
ggcatcgtcgccggcacgctgtcgtcgtcgttcgtggccgggccggtggcgatcgcgctg
gagcggcgctccggccaggcgccgccggctcccgccgcgccccgggtcaggcccgtacgc
cgcgacgactccggcgcggtggtctga
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