Microbispora hainanensis: OHB01_29975
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Entry
OHB01_29975 CDS
T09710
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhai
Microbispora hainanensis
Pathway
mhai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OHB01_29975 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhai03021
]
OHB01_29975 (rpoB)
03400 DNA repair and recombination proteins [BR:
mhai03400
]
OHB01_29975 (rpoB)
Enzymes [BR:
mhai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OHB01_29975 (rpoB)
Transcription machinery [BR:
mhai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OHB01_29975 (rpoB)
DNA repair and recombination proteins [BR:
mhai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OHB01_29975 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WUP81140
LinkDB
All DBs
Position
complement(6467834..6471322)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAASPHASSRAFAVPPGPRRVSFARIEEPLEVPDLLALQTESFDWLVGNERWKGRVEAAR
QAGRRDIPLQSGLEEIFEEISPIEDFSGTMSLSFREHRFEPPKYSVDECKDRDMTYSAPM
FVTAEFINNTTGEIKSQTVFMGDFPLMTSKGTFIVNGTERVVVSQLVRSPGVYFERSVDK
TSDKELFGGKVIPSRGAWLEFEIDKRDSVGVRIDRKRKQPVTVLLKALGWTGDQILERFG
QYESMRATLEKDHTSGQDDALLDIYRKLRPGEPPTRESAQALLENLYFNPKRYDLAKVGR
YKINKKLGVQADITQGTLTDEDIVATIEYLVRLHAGEESMPVAGGEVSVETDDIDHFGNR
RLRTVGELIQNQVRLGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQL
SQFMDHINPLAALTQKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIESPEGPNIGL
IGSLASFGRVNAFGFVETPYRRVVDGKVTDEIDYLTADEEDKYVKAQANTALNPDGSFAE
PRVLVRTKGGETELARADEVDYIDVSPRQMVSVATAMIPFLEHDDANRALMGSNMQRQSV
PLLKSEAPLVGTGMEYRAATDAGDVITAEKAGVVEEVSADYITVMNDDGTRTTYRVAKFK
RSNQGTCFNQKPIVSEGDRVERGQVVADGPCTDNGEMALGKNLLVAFMPWEGHNYEDAII
LSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNASEDALADLDERGIIRIGADV
ETGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVRHGESGKVIGVRVFSRE
EGDELPPGVNELVRVYVAQKRKITDGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDII
LNPLGVPGRMNVGQVLETHLGWIAAQGWDISGVEEEWAERLRDKDADRVEPWTNVATPVF
DGAGEEEIIGLLGNTLVNRDGDRLVMPSGKARLFDGRSGEPFPHPISVGYIYILKLLHLV
DDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVQ
GRVKVYEAIVKGENIPEAGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFRA
AEELGIDLSRRPHEGAMTVDDI
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcctcgcctcacgcctcgtcccgcgctttcgccgtaccgcccggtcctcgccgc
gtctccttcgcgcggatcgaggagccgctcgaagtgcccgaccttctcgccctgcagacc
gagtcgttcgactggctggtgggcaacgagcgatggaagggccgggtcgaggcggctcgc
caggccgggcgaagggacattccacttcagtcgggtctggaagagatcttcgaggagatc
agtcccatcgaggacttctccggaaccatgtccctgtcgttccgggagcacaggttcgag
ccgcccaagtactcggtcgacgagtgcaaggacagggacatgacctactccgccccgatg
ttcgtcacggcggagttcatcaacaacaccacgggtgagatcaagagccagacggtgttc
atgggcgacttcccgctcatgacgtcgaagggcaccttcatcgtcaatggcaccgagcgt
gtcgtggtgtcccagctcgtccgttcaccgggtgtctatttcgagcgcagcgtcgacaag
acctcggacaaggagctgttcggcggcaaggtcatcccctccaggggagcctggctggag
ttcgagatcgacaagcgcgacagcgtcggcgtgcgcatcgaccgcaagcgtaagcagccg
gtcacggtgctgctgaaggcgctcggctggaccggcgaccagattctggagcgtttcggt
cagtacgagtcgatgcgggcgaccctggagaaggaccacacctccggccaggacgacgcg
ctgctcgacatctaccgcaagctgcgtccgggcgagcccccgaccagggagtcggcgcag
gcgctgctggagaacctgtacttcaacccgaagcgctacgacctcgccaaggtcggccgt
tacaagatcaacaagaagctgggcgtccaggccgacatcacccagggcacgctgaccgac
gaggacatcgtcgccaccatcgaatacctcgtccggctgcacgccggcgaggagtcgatg
ccggtcgccggcggcgaggtctccgtggagaccgacgacatcgaccacttcggcaaccgt
cgtctgcgcacggtgggcgagctcatccagaaccaggtccgcctgggcctggcccgcatg
gagcgcgtcgtccgcgagcgcatgaccacgcaggacgtcgaggcgatcacgccgcagacc
ctgatcaacatccgcccggtcgtggcgtcgatcaaggagttcttcggcacctcgcagctg
tcgcagttcatggaccacatcaacccgctcgccgccctcacccagaagcggcgcctgaac
gcgctgggcccgggtggtctgtcgcgtgagcgggccgggttcgaggtccgcgacgtgcac
ccctcgcactacggccgcatgtgcccgatcgagtcgcccgagggcccgaacatcggcctg
atcggctcgcttgcgtccttcgggcgggtcaacgccttcggtttcgtcgagacgccctat
cggagggtcgtcgacggcaaggtgaccgacgagatcgactacctgaccgccgacgaggag
gacaagtacgtcaaggcgcaggccaacacggcgctcaatcccgacggatcgttcgccgag
cctcgcgtcctggtgcgtacgaagggtggcgagaccgagctcgcccgcgccgacgaggtc
gactacatcgacgtttccccgcgccagatggtgtcggtggcgacggcgatgatcccgttc
ctggagcacgacgacgccaaccgcgcgctcatggggtcgaacatgcagcgtcagtcggtg
ccgttgctcaagagcgaggcgccgctggtcggcaccggcatggagtatcgcgcggcgacg
gacgccggtgacgtcatcacggccgagaaggccggtgtggtggaggaggtctcggccgac
tacatcacggtgatgaacgacgacggcacccggacgacgtatcgggtggcgaagttcaag
cggtcgaaccagggcacctgcttcaaccagaagccgatcgtgtccgagggcgaccgggtc
gagcggggtcaggtcgtcgccgacggtccgtgcaccgacaacggtgagatggcgctgggc
aagaacctgctggtggcgttcatgccctgggaggggcacaactacgaggacgcgatcatc
ctgtcccagcgtctggtgcaggacgacgtgctgtcgtcgatccacatcgaagagcacgag
gtcgacgcccgcgacaccaagctgggtccggaggagatcacccgcgacatccccaacgcc
tccgaggacgcgctggccgacctcgacgagcgcggcatcatccgcatcggcgccgacgtg
gagacgggagacatcctggtcggcaaggtcacgccgaagggtgagaccgagctgacgccg
gaggagcggctgctgcgggcgatcttcggtgagaaggcgcgtgaggtgcgcgacacctcg
ctgaaggtgcgacacggtgagtcgggcaaggtcatcggggtgcgggtgttcagccgtgag
gagggcgacgagcttcctccgggcgtcaacgagctggtgcgcgtgtacgtggcgcagaag
cgcaagatcaccgatggtgacaagctcgccggccgtcacggcaacaagggcgtcatctcc
aagatcctgccggtggaggacatgccgttcctcgaggacggcacgccggtcgacatcatc
ctcaacccgctgggcgtgccgggccggatgaacgtcggccaggtgctggagacccacctc
gggtggatcgccgcccagggctgggacatcagcggggtggaggaggagtgggccgagcgc
ctgcgcgacaaggacgcggacagggtcgagccctggaccaacgtcgccaccccggtgttc
gacggcgccggcgaggaggagatcatcggtcttctgggcaacacgctggtcaaccgcgac
ggcgaccgtctggtgatgcccagtggaaaggcgcggctgttcgacggccgctccggcgag
ccgttcccgcacccgatctcggtgggttacatctacatcctgaagctgctgcacctggtc
gacgacaagatccacgcccggtcgaccggtccgtactcgatgatcacccagcagccgctg
ggtggtaaggcgcagttcggcggccagcgcttcggtgagatggaggtgtgggccctggag
gcgtacggcgccgcctacgcgctgcaggagctgctgacgatcaagtccgacgacgtgcag
ggccgggtgaaggtctacgaggccatcgtcaagggcgagaacatccccgaggcgggcatt
cccgagtccttcaaggtcctcatcaaggagatgcagtcgctctgcctgaacgtcgaggtt
ctctccagcgacggcatgtcgatcgagatgagggacaccgacgaggacgtcttccgcgcg
gcggaggagctcggcatcgacctgtcccggcgtccccacgagggcgcgatgaccgtcgac
gacatctga
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integrated database retrieval system
