Microbispora hainanensis: OHB01_34280
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Entry
OHB01_34280 CDS
T09710
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mhai
Microbispora hainanensis
Brite
KEGG Orthology (KO) [BR:
mhai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhai03016
]
OHB01_34280
Enzymes [BR:
mhai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OHB01_34280
Transfer RNA biogenesis [BR:
mhai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OHB01_34280
Prokaryotic type
tRNA splicing ligases
OHB01_34280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WUP81956
LinkDB
All DBs
Position
7483960..7485114
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AA seq
384 aa
AA seq
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MPKHIAPKVLSWASEIDDGTIDQAARAARLPFVPGHVALMPDAHVGIGATVGSVIPTEGA
IIPSAVGVDIGCGMVATETTLTAADLPDSLDPLMRLVERRIPAGVGKGHDDRAVDRALGD
LGRPHTGLTPKQENTVACQFGTLGSGNHFVEVCLDERDRVWTVLHSGSRGIGNQLATAHI
NGAKRLMRSLGIGMEDYDLAYFTQGTPEFTAYIEDMLWAQRYAMASRARMDKVLSDALFR
VVGSGARVRTINCHHNFTQLEVHDGKELWITRKGAIKADTGDEGVIPGSMGTRSYIVRGR
GNPLSYNSCSHGAGRRMSRSRAKRELSAASLKEAMRGRTWNADRAAALVDEHPEAYKPID
QVMADQKDLVEVRHTLRQVFNYKG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcacatcgccccgaaggtgctgtcctgggcgagcgagatcgacgacgggacg
atcgaccaggccgcccgggcggcgcgcctgccgttcgtgcccggtcatgtcgcgctcatg
cccgacgcacacgtcgggatcggggcgacggtcggctccgtcatcccgacggagggcgcg
atcatcccgtccgccgtcggcgtggacatcggctgcggcatggtcgcgaccgagaccacg
ctcacggccgccgacctgcccgactcgctcgacccgctgatgcggctggtggagcggcgc
atcccggcgggagtgggcaaggggcacgacgaccgggcggtggaccgggcgctcggcgac
ctcggccggccgcacaccggcctgacgcccaagcaggagaacaccgtggcctgccagttc
gggaccctcggctcgggcaaccacttcgtggaggtctgcctcgacgagcgcgaccgggtg
tggaccgtgctgcactccggctcgcgcgggatcggcaaccagctcgccaccgcgcacatc
aacggcgcgaagcggctcatgcgcagcctcgggatcgggatggaggactacgacctcgcc
tacttcacccagggcaccccggagttcaccgcgtacatcgaggacatgctgtgggcgcag
cgctacgcgatggcgtcgcgggcgcggatggacaaggtgctgagcgatgcgctgttccgc
gtcgtcggctccggcgcccgggtccgcacgatcaactgccaccacaacttcacgcagctg
gaggtccatgacggcaaggagctgtggatcacccgcaagggcgcgatcaaggcggacacc
ggggacgagggcgtgatcccgggctcgatgggcacccgctcctacatcgtgcgcgggcgg
ggcaacccgctgtcgtacaactcctgctcgcacggcgcggggcgcaggatgtcgcggagc
cgggcgaagcgcgagctgtcggcggcgtcgctcaaggaggcgatgcgcgggcggacctgg
aacgccgaccgtgccgccgcgctggtcgacgagcacccggaggcgtacaagccgatcgac
caggtgatggcggaccagaaggacctcgtggaggtccggcacacgctgcgccaggtgttc
aactacaagggatga
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