Mannheimia haemolytica USMARC_2286: N220_06145
Help
Entry
N220_06145 CDS
T02758
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mhal
Mannheimia haemolytica USMARC_2286
Brite
KEGG Orthology (KO) [BR:
mhal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhal03016
]
N220_06145
Enzymes [BR:
mhal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N220_06145
Transfer RNA biogenesis [BR:
mhal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N220_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGR74910
LinkDB
All DBs
Position
complement(1183405..1185381)
Genome browser
AA seq
658 aa
AA seq
DB search
MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYFIPPAEMKKVMHGDSVK
AVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIKQTIPANTHKKATE
KLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEKN
YELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIKQNGKRTGWRLVVAIADPTAYIP
ENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLNGNLIK
ETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQSEETKQQIEWLHQFTQARIQWRAENA
LLFKEQGDYTFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSQHAKTGVFNT
HSGFDPKNYELVKSFLLQTLASDENRDELAERYSAERLATLEGYCQMQRDIQDYPEKFLE
LRLRRYLTFAEFKAEVAPHFGLGITDYATWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEE
SVLSRLQEARRQNRLVERDIADWLYARYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGA
QIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaatccccttttagcccaactcaaacaacaaattgaagcaagcaaagaa
tatgtcgcaggcgttgtcaaagcctcagacaaagcattcggttttttagaatgcgataaa
aaaagctattttattccacctgcggaaatgaaaaaagtaatgcacggtgattcagtgaaa
gccgtagtcaaacgtgatggcgacaaagaacaggtagaaattgattcactacttgagcca
atgctggatagatttattgcccaagttcgcttgaataaagagggcaaattgcaacttgcg
gttgatcacccaagcattaagcaaactatcccggcaaatacccataaaaaagccactgaa
aaattagaaaatggcgactgggtggttgcacaattaaaaacgcacccattgcgtgacgac
cgttttttctttgctcaagttacccaatttatctgtaaagaatctgataattttgcccct
tggtgggtcacacttgcccgccacgaacagcctcgtgaaccggtcgcaaatgaaaaaaac
tatgaattacacgatgaattagctcgtgaagatttatctcatctttactttaccactatt
gacagcccaagcacgcaagatatggacgatgctctgttcatcgaaccaattaagcaaaat
ggcaagcgaaccggctggcgtttagtggtagcgattgctgacccaaccgcttatatccca
gaaaattcccatattgaaaaagccgctcgccagcgttgtttcaccaactatttgccgggc
tttaacattccaatgttacctcgagaactctcagacgatctctgttcgcttgtcccgaat
gaaaaacgccctgccctcgttggctttattgaaaccgatttaaacggcaatctcattaaa
gagacaacctttacctctgcttgggtcgaatcaaaagatcgcttggcttacgacgatgtt
tccgattatctcgaaggcgtggaaaatgcgtggcaacctcagtctgaagaaacaaaacaa
caaattgagtggctacatcaatttactcaagcccgcattcaatggcgtgccgagaatgcg
ttgctattcaaagaacaaggcgattatacctttgagttaaatgaagatggctcggtaaaa
gatattcacgttgaatatcgccgtattgcgaatcaaatgatcgaagaatcaatgattctt
gccaatatttgttgtgcaaaattcttaagccaacatgccaaaaccggtgtatttaatacc
cattcaggttttgatccgaaaaattatgaattggtaaaatcatttttactccaaacttta
gccagcgatgaaaatcgtgatgagcttgccgaacgctactccgccgagcgtttagcaacc
ttagaaggctattgccaaatgcaacgtgatattcaagactacccagagaaattcttagag
ttgcgtttacgacgttatttaaccttcgctgaatttaaagccgaagttgccccgcatttc
ggactaggcattaccgattacgccacttggacatcacccatccgtaaatatggcgatatg
gtaaaccaccgtttaatcaagcaagtgttacttggcaaacaaagccaagcggtggaagaa
tcagttttaagccgtttacaagaagctcgccgtcaaaaccgtttagtagaacgtgatatt
gctgactggctttatgctcgttaccttgccccaatggtggaacaagcggtcgaatttgag
tgcgaaattgcagatgtttcccgtggtggcttgcgtgcgaaagtcataaaaaacggtgct
caaatttttgtgccattctccagcttgcacgacaacaaagaggaaatggaataccgccaa
gaagaacttgcactttatattaaaggtgaaaaagcctatcagatcgggcaagcggtgaaa
gtgaaactcaccgaagtacgcttagaaacccgctcaatcgtaggaaatatcatttaa
DBGET
integrated database retrieval system
