Mannheimia haemolytica USMARC_2286: N220_10035
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Entry
N220_10035 CDS
T02758
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhal
Mannheimia haemolytica USMARC_2286
Pathway
mhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N220_10035 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhal03021
]
N220_10035 (rho)
03019 Messenger RNA biogenesis [BR:
mhal03019
]
N220_10035 (rho)
Transcription machinery [BR:
mhal03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
N220_10035 (rho)
Messenger RNA biogenesis [BR:
mhal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N220_10035 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGR75618
LinkDB
All DBs
Position
1895199..1896413
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AA seq
404 aa
AA seq
DB search
MGENQMGLENLARLRKQDIVFAILKQHAKSGEDIFGQGVLEILPDGFGFLRSSDSSYLAG
PDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDSVNDDKPEASRSKILFEN
LTPLHANSRLKMERGNGSKEDLTARILDLAAPIGKGQRALIVAPPKAGKTVLLQNIAQSI
THNHPECELIVLLIDERPEEVTEMQRTVRGEVIASTFDEPATRHVQVAEMVIEKAKRSVE
HKKDVVILLDSITRLARAYNTVTPVSGKILSGGVDANALHRPKRFFGAARNVEEGGSLTI
IATALVDTGSKMDEVIFEEFKGTGNMELHLSRRIAERRIFPAIDFNRSGTRKDDLLMAAD
ELQKTWMLRKVLNPMDEVDAIEWLIDKLMMAKTNEEFFEIMKRS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaatcaaatgggcttagaaaatctggctcgtttacgtaaacaagacatcgta
tttgctattcttaaacaacacgcaaaaagcggtgaagacattttcgggcaaggcgtgctt
gaaattctaccggacggcttcggtttcctccgctcatcagatagctcatatttagccggc
cctgatgatatttatgtttctccaagccaaatccgccgttttaacttacaaactggcgat
aaaatagaaggtaaaattcgcccaccaaaagagggagaacgctattttgccctactgaaa
gttgattcagttaatgatgacaaaccggaagcctctcgcagtaaaattctctttgaaaac
ttaacccctctgcacgccaattctcgcttaaaaatggagcgtggcaatggatcaaaagaa
gatttaaccgctcgtattttagatttagccgccccaatcggtaaaggtcagcgagcgtta
attgttgccccgccaaaagctggtaaaaccgtgttactgcaaaatattgcacaaagcatc
acccataatcatcctgaatgtgagcttatcgtattattaattgatgagcgtccggaagaa
gtaacagagatgcaacgcaccgtacgtggtgaagtaattgcctcaacctttgatgaaccg
gcaacccgccacgttcaagttgcggagatggtaatcgagaaagcaaaacgctcggtagag
cataaaaaagatgtggtgattttattagactccatcactcgtttagcccgtgcctacaac
accgttaccccggtttccggcaaaatcctttccggtggtgtggacgctaacgccttacat
cgtccaaaacgtttcttcggtgcagcccgtaatgtggaagaaggtggcagcttaaccatt
atcgcaaccgcacttgtggataccggatcaaaaatggacgaagtgattttcgaggagttc
aaaggtacgggtaatatggaattacacctctcacgccgtattgctgaacgccgtatcttc
ccggctattgacttcaaccgctcaggtactcgtaaagatgacctcttaatggcagcagac
gaactccaaaaaacttggatgttacgcaaagtcctcaacccaatggacgaagtagatgct
atcgaatggctaatcgacaaattaatgatggcaaaaactaacgaagagtttttcgagatt
atgaaacgttcgtag
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