Mannheimia haemolytica USMARC_2286: N220_11190
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Entry
N220_11190 CDS
T02758
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhal
Mannheimia haemolytica USMARC_2286
Pathway
mhal03420
Nucleotide excision repair
mhal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N220_11190 (uvrD)
03430 Mismatch repair
N220_11190 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhal03400
]
N220_11190 (uvrD)
Enzymes [BR:
mhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N220_11190 (uvrD)
DNA repair and recombination proteins [BR:
mhal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N220_11190 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
N220_11190 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
AGR75836
LinkDB
All DBs
Position
complement(2132700..2134898)
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AA seq
732 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLLRSHYLDADLPQDFQIMDT
EDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRAKDIDHYNDPNEKKLVEIYQI
YQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRFQQILIDEFQDTNNIQYDLIRLL
AGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYDNAQTIRLEQNYRSTGNILSCANEL
IANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEARFVASQIKQWKEDEGDLAECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPTR
GIGDRTLDTLRQITRGRQITLWQAIQVAVQEEQLSGRATSSLLRFVELINALDQETEQMS
LAEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFVKPDEAEELTDLTAFLT
HASLEAGEAQASQHEDYVELMTLHSAKGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKKKLTISYAESRRLYGKEERHVPSRFIAELPEEHIREVRLRGSINRAASFN
QANSFAKNPTKTTASFLNDDTWKMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIK
WLIAKMANLERI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcattattattagacggtttaaatgacaagcagagggaggcggttgctgcc
ccgattggtaattatttagtgttagccggggcgggttcgggcaaaactcgggttttaacc
catcgcattgcgtggctgattggggtggaaaatgtgccggaatccaatattctggctgtt
acctttaccaataaagcggcggcggaaatgcgacatcggattgagtacactctttcccaa
tcgggcgataatcgattgttcggaatgtgggttggtactttccacagcattgccaaccgc
ttacttcgttcccactatttagatgcggatttaccgcaagatttccaaattatggatacc
gaagatcagcaacgtttactcaaacgtttactgaaactgcataatattgatgagaaacat
tttccgccaaaacacgttgcgtggtatatcaacgcccaaaaagataaaggcaaacgggca
aaagatattgatcactataacgatccgaatgaaaaaaaattggtggagatttaccaaatc
tatcaagatgcctgcgaccgagccggtttgttagattttgccgagctgttgattcgggct
tatgaactattcaaaaccaaatcaaccattttgcaacgttatcaacaacgttttcagcaa
attttgattgatgagtttcaagacaccaacaatattcagtacgacttaattcgtttgctt
gccggcgatgtcggcaaagtgatgattgtcggcgatgatgatcagtctatttatggttgg
cgtggggcacaggttgagaatatccaacgtttcttaaatgattatgacaacgctcaaacc
attcgcttagagcaaaattaccgctctaccggcaacattttaagctgtgccaatgaatta
attgccaataacgataaccgcttaggcaaaaatttatggacagatagcggtgatggcgag
cctgtggatatttactgtgccttcaacgaacttgatgaagctcgctttgttgcctcgcaa
atcaagcaatggaaagaagacgagggtgatttggcggaatgtgcggtgttgtatcgcagc
aacagccaatctcgtgtgattgaggaagctttaattcaagcgaatattccttatcgcatt
tacggtggaatgcgattctttgaacgccaagaaattaaagatgctctggcttatttacgc
ttaatcgccaatcgtcaagacgatgcggcgtttgaacgggtgatcaacacgccaaccaga
ggcattggcgatcgtaccttagacacactccgtcaaattacccgtggtcgccaaattacg
ctgtggcaagcaattcaagtggcggtgcaagaagaacaactttcagggcgtgccacttct
tccttattgcgttttgtagagctgattaatgctcttgatcaagaaaccgagcagatgtcg
cttgccgaacaaaccgattttgtgattaaaaaatcgggtttatatgaaatgtataagcaa
gaaaaaggcgaaaagggcgaagttcggattgaaaacttagaagagttagttaccgcaact
aagcagtttgtgaaacctgacgaagcggaagagctgaccgatcttaccgcatttttaacc
cacgcctcacttgaggctggagaagcccaagcctcgcaacacgaagattatgtcgaactg
atgacgctacattccgccaaaggattggagtttccccgtgtgtttattgtgggcgtggaa
gaagggattttcccaagcggaatgagctttgatgaaggcaggttgcaagaagaacgccgt
ttggcttatgtcggcataacccgagctaagaaaaaactgacgattagctatgccgaatca
agacggctttatggtaaagaagaacgccacgttccgtctcgctttattgctgaattacct
gaagagcatattcgagaagtgagattgagaggctcaattaaccgagcggcaagttttaac
caagctaattcatttgcaaaaaatccgacaaaaacgaccgcttcctttttaaacgatgat
acttggaaaatggggcagaaagtgaaccacgctaaatttggacaaggcacgattattaat
gtggagggctcaggtgaagccacccgtttgcaagttgcctttgtcggcaacggcattaaa
tggctgattgccaaaatggcaaatttagagaggatttag
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