Mannheimia haemolytica USMARC_2286: N220_12175
Help
Entry
N220_12175 CDS
T02758
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mhal
Mannheimia haemolytica USMARC_2286
Brite
KEGG Orthology (KO) [BR:
mhal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhal03016
]
N220_12175 (truD)
Enzymes [BR:
mhal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
N220_12175 (truD)
Transfer RNA biogenesis [BR:
mhal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N220_12175 (truD)
Prokaryotic type
N220_12175 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
FAM177
Motif
Other DBs
NCBI-ProteinID:
AGR76015
LinkDB
All DBs
Position
2314788..2315702
Genome browser
AA seq
304 aa
AA seq
DB search
MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKIRKTNASTLFVGEKLAK
FVGISEREMSYAGLKDRHNRKIRVGSLAGNHFELLLRDVAESEELIYRLQQLQAVGFPNY
FTEQRFGRDGHNLTQALRWANGEISVKDRKKRSFYLSAARSEVFNLVVSQRINDCLTQKI
LENDYVQLAGSNSFFCVKSDEIAETQARLAQQDLLLTAPLIGERSLELECNPAEKAIIEQ
HAQLVALMQKERMAAARRAMLCKPQNLEWQFEQEGLRLKFFLDSGSYATALVRELILLTE
ESEA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaattatttatactctcctcctcaagctgttgggcgactaaaagccgaatat
gcagactttattgtgcgtgaagaactgggctacgaactagccggcgaaggggaatttgtg
gcggttaaaatccgcaaaaccaacgccagcacgctgtttgtgggggaaaagttagccaaa
tttgtcggtatttccgagcgtgaaatgagttatgcaggcttaaaggaccgccacaaccgc
aaaattcgtgttggttcgctcgccggcaatcattttgaattattgctacgtgatgtagca
gaaagcgaagagttgatttaccgtttgcaacagttgcaagcggtcggatttcccaattat
tttaccgaacaacgtttcgggcgagacggacataacctgactcaagccttgcgttgggca
aacggggaaattagcgtgaaagatcgcaaaaaacgcagtttctacctttccgctgcccgc
tcggaagtgtttaatttagtggtttcacagcggattaatgactgcttaacccaaaaaatc
ttggagaatgattacgttcaacttgccggctctaacagctttttctgcgtgaaatcggac
gaaattgctgaaactcaagcccgtttagcacagcaagatctacttctcaccgctccgctg
ataggcgaaagatcgcttgaattagaatgcaatcctgctgaaaaagccatcatagagcaa
cacgctcaattggttgccttaatgcaaaaagagcgtatggcagccgctcggcgagcaatg
ctttgtaagccacaaaatctggaatggcaatttgaacaagaagggctacggttaaaattc
tttttagattcaggcagttatgccactgcactggtgcgagagttaattctgcttaccgaa
gagagcgaagcttag
DBGET
integrated database retrieval system
