Mannheimia haemolytica D171: J450_00630
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Entry
J450_00630 CDS
T02747
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mham
Mannheimia haemolytica D171
Brite
KEGG Orthology (KO) [BR:
mham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mham03016
]
J450_00630
Enzymes [BR:
mham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J450_00630
Transfer RNA biogenesis [BR:
mham03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J450_00630
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF3575
Knl1_RWD_C
Motif
Other DBs
NCBI-ProteinID:
AGQ37718
LinkDB
All DBs
Position
138446..139564
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AA seq
372 aa
AA seq
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MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPILGLIQLFDGQQVSLID
PNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPEPMLDTQVMAAFAGIGISM
GFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADVWYLLPVYEKLAQALTKSTWQ
SAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREELAILQVLAKWRIEEAQKRNLALN
FVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGKKILWLVEQGKAIESNDYPELIQRL
VDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKRQLNQLFKWYIDGKPSEKIPELLIGWR
KPFGEQLLSVLS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttgattcactaccaatgggttgaaacaaatgagcaattagaggccgtatgt
gaacaggccagaaaaacaaaagtagttgccttagatacagagtttatccgtacacgtacc
tattatccgatattgggtttaattcaactctttgatggccaacaggttagccttattgat
ccaaatacgatttctgacttctcgccttttgtgtcattattagccgataaaaatatcata
aaagtattacatgcctgtagtgaggatttagaagtttttgagtatcaatttaagcaattg
ccagagccgatgttggatactcaggtgatggcagcctttgccggcattggtatttcgatg
gggtttgcaaaattggtttcccactacttaaatattgaactagacaaaggcgcttcccga
accgattggcttgccagaccgctaagcgctgaacaattacaatatgcggcagctgatgtt
tggtatttattgccagtttatgagaaattggcacaagcattaacaaaaagcacttggcaa
agtgctgtagcagaggagtgtgtcgctttgttgaagaaagcgaaacagcctatcaataag
gaaaaagcctataaaaatattgccaatgcttggcgattgaatcgggaagagttagccata
ttacaagtattagcgaaatggcggattgaagaagcacaaaagcgcaatcttgccttaaat
tttgtcgtgaaggaggcaagtttagttcaaatcgcaaaaagctgtcctaaacacacttct
tcgctgttagaatttatgcacccaaatgaagtcagaattcacggaaaaaaaatactatgg
ttggttgagcaaggaaaagcaatagaatcgaatgattatcctgaactcattcagcgcttg
gtggatgaaaagggttataaatattatatgcaagcgatgttgcaaaaattattagaaatt
caaccgcttgatatcgtaccggaattggttgcaagtaaacgtcaattaaatcagctattt
aaatggtatattgatggaaaaccatcagaaaaaattcctgaattattaatcggttggcga
aaaccttttggtgaacagctgctatcggttttatcttaa
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