Mannheimia haemolytica D171: J450_01970
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Entry
J450_01970 CDS
T02747
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mham
Mannheimia haemolytica D171
Pathway
mham03030
DNA replication
mham03410
Base excision repair
mham03420
Nucleotide excision repair
mham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J450_01970
03410 Base excision repair
J450_01970
03420 Nucleotide excision repair
J450_01970
03440 Homologous recombination
J450_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mham03032
]
J450_01970
03400 DNA repair and recombination proteins [BR:
mham03400
]
J450_01970
Enzymes [BR:
mham01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J450_01970
DNA replication proteins [BR:
mham03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J450_01970
DNA repair and recombination proteins [BR:
mham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J450_01970
NER (nucleotide excision repair)
GGR (global genome repair) factors
J450_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGQ37951
LinkDB
All DBs
Position
complement(417441..420299)
Genome browser
AA seq
952 aa
AA seq
DB search
MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRLGEPTGAMYGVLNMLKSLISQVNPSHIAV
VFDTKGKTFRYELFKQYKSHRPPMPDDLRPQIEPLHRIIKALGIPLISIEGVEADDVIGT
LAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDFL
ALMGDSADNIPGVKGVGEKTALALLQGIGSLEQIYANLDQIATLSFRGAKNFAPKLEAEK
ANADLSYLLATIKTDVELDVTHDQLLTQPQDRAELAQLFEHYEFKRWLNEVNQNANPVTQ
TSAEKVPNNYQVTQAVRNEENVANVVEIDRSKYETVDTEQKLSAWIEKLTAARLIAVDTE
TDSLDAMSANLVGISFALENGEACYIPLGHKQKAQPQQADMFGDEERSESPSSDELVKNQ
LNLTACLSKLKPILLNPEIKKIGQNIKYDLTIFANYGIGLQGVAFDTMIESYTQNSTGRH
NMDDLAARYLGHKTIPFEELAGKGKNQLTFDKIEIAKAAEYAAEDADVTMKLHQVLWEKL
QQEPELVKLFDEIEMPLVGVLSRIERNGVLIDPKKLLTQSAEIEKRLEEVETLVHAEAGQ
TFNLASTKQLQEILFEKLGLPVLKKTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSK
LKSTYTDKLPQLINKKTGRVHTSYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVA
REGYKIVAADYSQIELRIMAHLSNDEGMINAFAEGKDIHRATAAEIFGVELGEVTSEQRR
SAKAINFGLIYGMSSFGLSNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAVEKGYV
ETLFGRRLYLPDIKSGNAILRKAAERVAINAPMQGTAADIIKVAMIGIDNAIRDNDEIKM
IMQVHDELVFEVKADKIDHYSQLIKTEMEKAISLKVPLIAEVGVGENWDEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcgcaaaaaatccactggtattggtggatggttcttcctatttatatcga
gcatttcacgctttccctccgctcactaatcgcttaggcgaaccgacaggggcaatgtat
ggcgtgctgaatatgttaaaaagcctgatttcacaagtgaatccaagccatattgctgtg
gtgtttgataccaaagggaaaaccttccgttatgagttgtttaagcaatataaatcgcac
cgcccaccaatgcccgatgatttacgccctcaaattgagcctttgcatcgcattatcaaa
gccttaggcattccactgatttcgattgaaggtgtggaagctgatgatgtgatcggcacg
cttgctgtgcaagccgctaaagacggcaaagatgtgttgatcagcaccggcgataaagat
atggcacaattggtgaacgatcacattatgttgattaacacgatgaacaatactttgtta
gatcgtgaaggcgtgattgaaaaatatggcattccgcctgagttgattatcgactttctg
gcattaatgggcgattccgccgataacattccgggcgtaaaaggtgtgggggaaaagacc
gcattagctttattgcaaggcattggttcacttgaacagatttatgctaatttggatcaa
attgccaccctttctttccgtggggcaaaaaatttcgccccaaaattggaagcggaaaaa
gcgaatgccgatttatcctatttgcttgctaccatcaaaaccgatgtggaacttgatgtt
actcacgatcaacttttaacacagccgcaagaccgtgctgagcttgctcaattatttgag
cattatgaatttaaacgctggctgaacgaagtgaatcaaaatgccaatccggtcactcaa
acttcggctgaaaaagtaccgaataattaccaagtaacacaagcggtcagaaatgaggaa
aatgttgcaaatgtggtcgagatcgatcgtagcaaatatgagaccgttgatactgaacag
aaattatcagcctggatcgaaaaactcaccgcagctcgtttgattgcggtggataccgaa
accgacagccttgacgcaatgtcggctaatttggtcggtatttcctttgcactggaaaat
ggcgaggcgtgctatattccgcttgggcataagcaaaaagcccaaccgcaacaagccgat
atgttcggtgatgaggagcgttcagaaagcccgtcttccgatgaattggtaaaaaatcag
ctaaatttgaccgcttgtttaagtaaactcaagccgattttgcttaacccggagattaaa
aagatcgggcagaatattaaatatgatttaaccatttttgcgaactacggcattgggcta
caaggtgttgcttttgatacgatgattgaatcttacacccaaaacagcaccggtcgtcat
aatatggacgatttagccgcccgttatttggggcataaaacgattccgtttgaagagctt
gctggtaaggggaaaaatcaactgaccttcgataaaatcgagatagcaaaagcggctgaa
tatgcggcagaagatgccgatgtgacgatgaaactccaccaagtattgtgggaaaaacta
cagcaagagcctgaattggtgaagttattcgatgaaattgaaatgccacttgtgggcgta
ctttctcgaattgaacgcaatggcgtgttgattgacccgaaaaaattattgacccaatcg
gctgaaattgaaaaacgtttggaggaagttgaaacattagtacacgcagaagcagggcaa
accttcaatcttgcctcaactaaacaattacaagagattttgtttgaaaaattaggcttg
ccggtgttgaagaaaaccccaaaaggtgcaccctcaaccaacgaagaagtgttagacgag
ttggctcaacaagggcatttagtgccgaagttattaatggagcatcgtgggttaagtaag
ttgaaatctacctacaccgataaattaccacaactgattaacaaaaaaacagggcgggtg
catacctcttacaatcaagcagtcaccgcaaccggacgcctttcttccagcgatccgaat
ttgcagaacattccgatccgcaatgaagagggcagacggattcgccaagcttttgtcgcg
agagaaggttataaaattgtcgctgccgactattcacaaattgagctacggattatggct
catttatcgaatgatgagggaatgattaacgcctttgcggagggcaaagatattcaccgt
gctaccgctgccgaaattttcggggtggagttaggtgaagtcacctccgaacaacgccgc
agtgcgaaagcaattaacttcgggctgatttacggaatgtcgtcatttgggctttcaaac
caattagggattgggcgtgcagaggctcaaaaatatatggatctctacttccaacgttac
ccggcggttcaacaatttatgaccgatattcgtgaagttgcagttgaaaaaggctatgtt
gaaaccctatttggtcgccgtttgtacttgcctgatattaaatccggcaatgctattttg
cgtaaagcagcagaacgggtggcaatcaacgccccaatgcaaggcacggctgccgatatt
attaaggtggcgatgattggtattgataatgcgattcgtgataatgatgaaatcaaaatg
attatgcaggttcacgatgaattggtgtttgaagtcaaagccgataaaatcgaccattac
agccaattaatcaaaaccgaaatggaaaaagcgattagcctcaaagtgccactgattgcc
gaagttggcgtaggcgaaaactgggacgaagctcattaa
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