Mannheimia haemolytica D171: J450_03195
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Entry
J450_03195 CDS
T02747
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mham
Mannheimia haemolytica D171
Pathway
mham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J450_03195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mham03400
]
J450_03195
Enzymes [BR:
mham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J450_03195
DNA repair and recombination proteins [BR:
mham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J450_03195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
UvrD-helicase
NAT10_TcmA_helicase
SLFN-g3_helicase
DUF2489
AAA_22
UvrD_C
DEAD
ResIII
nSTAND3
Imm71
PhoH
TrwB_AAD_bind
SH3_13
AAA_16
FtsK_SpoIIIE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGQ38183
LinkDB
All DBs
Position
complement(704873..706834)
Genome browser
AA seq
653 aa
AA seq
DB search
MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVLAAALVSYQVGLGHTAL
RLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVLKNHIAFSYSPETIKPMLF
QNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSILNQLFTGKAQTIDWQKIAVA
TALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQKPYLQIALAAPTGKAAARMKESL
ESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTEKTKYHTKNPWHYDLVVLDEASMID
LSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSIMGELGSFIDNGYSQSHCDYLKAVTDY
QIEAGNALPIGDCLSHLKHSYRFGEKAWIGELANAVNDQKINLSWEIFDKYKNSDKLENF
CYPETKETTDKSSWIEKSVQMVVDKAVELYRDYLQAVQKREKNPDSVSVKAIFEKFQKVR
ILSALRVSELGVERLNMAIAEGLRKASLVKFNHSRDRYIGKPILMTENMPINSIASGDVG
IILPDENGESRVYFDSLQENREHHSLPLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHS
ISPVLTKELIYTAITRAKDKFTLFGSEKVWKYSVGAKTERQSGLKEQIRGRFS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatttattattggaacttaaacaagaaaaggcgatttctgacttaaattatcaa
tttgcccgttttattgataataagcagaaaccctatgggtattcgcctttggagcaagat
ttagctgtgttagccgctgcgttggtttcttaccaagtgggacttgggcatacggcatta
cgtttggaaaatctcagtctttcttctctttttgaattaaatagcaagccacaaacttat
catttgctcgaacaaattttgcaaaaaattgagcaaattccaccgcttgaatggcagagt
gtgctgaaaaatcatatcgcttttagctattctcccgaaacaattaaaccgatgttattc
caaaacagcttgctctatttttatcgctactggcaagcggagcatcgcattgccggttat
ttacaacaagcggttgatttttcggaaaaatttgcaaataccgaattaaaccaaagcatt
ctcaaccaactattcactgggaaagctcaaactatcgactggcaaaagattgccgttgca
acagcattagaaaagcagtttagcttaatttcaggtgggccgggaaccggaaaaacaact
acggtagtaaaattattactcgggctgcaattaaaacagcaagcactacagaaaccatat
ttgcaaatcgctctggctgcaccaaccggaaaagcagcagcaagaatgaaagagtcgctg
gaaagcaagttggcggaagaaaaggggttatctgaggagttaaaacgctctattccaact
gaagcagtgactattcatcgcttgcttggtgcgagaccattaactgagaaaaccaaatat
cataccaaaaatccgtggcactatgatttggtcgtattagatgaggcttcaatgattgat
ttatcaatgatggagaaagttgttcaagcgctcaaaccaaactctcgcttgataatgctg
ggagataaagatcagcttgcttctgtggaagctggttcaattatgggggaacttggctct
tttattgataatggttatagccaatcccattgcgattacttaaaagccgttaccgactac
caaattgaagccggtaatgcgttgccgattggtgattgtttatctcacttaaaacatagc
tatcgatttggcgaaaaagcctggattggagagcttgcaaatgcagtaaatgatcaaaaa
attaacctttcgtgggagattttcgacaaatataaaaacagtgataagttagaaaatttc
tgttatccggaaacgaaagagacaacggataaatcaagctggattgaaaaaagtgtgcaa
atggtggtggataaagcggttgaactttatcgtgattatttacaagcggttcaaaaacgg
gagaaaaatccagattcagtgagtgtgaaagcgatttttgagaaatttcaaaaagtccga
attttatcagccttaagggtaagtgaactgggggttgaacgtcttaatatggcgattgcg
gaaggcttgcggaaagctagcttagtgaaatttaatcatagccgagaccgctatatcgga
aaaccgattttaatgacagaaaatatgccgataaatagcatagccagcggtgatgtcggc
atcattttgccggacgaaaatggagaaagccgagtttattttgattccttacaggaaaat
agagaacaccatagtttgcctctaggtagggtttcaaattatgaagcagcttatattatg
actgtgcataaatcgcaaggttctgaatttgaacatacggtattggtgttgccccattcg
atttccccggtgctgacgaaagagttgatttacaccgcaatcacaagggcaaaagataaa
tttaccttatttggtagcgaaaaagtttggaaatacagtgttggtgccaaaaccgaaaga
caaagtgggctaaaagaacaaataagaggcaggtttagctaa
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