Mixta hanseatica: K6958_02310
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Entry
K6958_02310 CDS
T08912
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
mhan
Mixta hanseatica
Brite
KEGG Orthology (KO) [BR:
mhan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhan03019
]
K6958_02310 (csrD)
Messenger RNA biogenesis [BR:
mhan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K6958_02310 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
HemY_N
Motif
Other DBs
NCBI-ProteinID:
UQY44558
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Position
486087..488036
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AA seq
649 aa
AA seq
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MRLTTKLSAFVTLLITLAIVLMLAGCTLSFIWLRSEWTEQQVQALRTEVDQALLTQSPAD
LTPWLRRTMPLMAIEQLQIISKENAILSLSRRQYPLLDDEPNRFRRYDLPLLHQQGWVLR
VELLDPANTRFKSLLGSSMIIAVVLAAAFMLLLLVPTHRWLWRQLKGMESLEKRAERIID
GERRGIGRGNVNEWPSKASTAIDLLLDDLQEAGEQRTRIDTLIRAFTAQDAATGLNNRLF
FDNQLATLLEDQEKVGTHGVVMMIRLPDFDSLSEIWGSSVVQDTLFSLVNMLSTFVMRYS
GALLARYFRSDFMVLLPHRTLKEADGIAAQLIKAVDALPPGAMIDRQNMMHIGISAWRSG
QTTQQVMESVEQATRHASLQGGNTWVTAEGADTDGGRGSVKWRTLLEHTLKRGGPRLYQK
PAVLRDGHVHHREMLPRIFDGEKELLAAEFMPLVQQMGLAEAYDRQLMQRIMALSACWPE
ETLAVPLTIDSLLQPAFQRTLRDMLLQCTKSQRQRFLFELAEAEVCQHFNRLQPALRLLK
GFGCRLAVSQAGLTVVSTAYITLAGVELIKLHPGLVRNIDRRTENQLFVKSLLEVCTMTP
AQVFAAGVRTREEWQTLSALGVAGGQGDFFSTSQPVNSNVKKYSQRVRV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaccaccaaactctcagcgtttgttacgctgcttattactctggcgatagtg
ttgatgttggcaggctgtacgctgagctttatctggctacgcagcgaatggacagaacag
caggtacaggcgttgaggacggaagtcgatcaggcgctgctaacgcaaagtcccgccgac
ttgacgccatggctacggcgcaccatgccgttgatggcgatagaacagttacaaattatc
agcaaagagaacgccattctttcgctatcccgccgccagtatcctctgctggatgatgaa
cccaatcgctttcgccgttacgatttgccgctgctgcatcagcagggttgggtgctgcgc
gttgaactgctcgacccggcaaatacccggtttaaatcgctgctcggctcctcaatgatc
attgccgtggtgctggctgcggcttttatgctgttgctgctggtgcccacccatcgctgg
ctatggcggcaactcaaggggatggaaagcctggaaaagcgcgctgaacgaattattgac
ggcgagcggcgcggtatcgggcgcggcaatgtgaatgaatggccttcaaaagcctctacc
gccatcgatttgctgctggacgatctgcaggaggcgggcgaacagcgcacccgcatcgat
acccttatccgcgcctttaccgcgcaggatgccgcgaccggcctgaataaccgcctgttt
tttgacaatcagctggcgacgctgttggaagatcaggagaaggtgggcacgcacggcgtg
gtgatgatgatccgtctgcccgattttgacagcctgagcgaaatatggggcagcagcgtg
gtacaggacacgctcttttcgctggttaatatgctttcaacctttgttatgcgctattcg
ggcgcgctgctggcacgctactttcgcagcgattttatggttctgctgccgcaccgcacg
ttaaaagaggcggacggcatcgccgcgcagctgattaaagcggttgatgcgctgccgcct
ggggcgatgattgaccggcaaaacatgatgcatatcggcatcagcgcgtggcgcagcggg
caaaccacccaacaggtgatggaaagcgttgagcaagccacgcgccatgcctcgttgcag
ggcggcaacacctgggtaacggcggaaggcgcggataccgacggcggacgcggcagcgtt
aaatggcgcacgctgctggagcatacgctgaagcgcggcgggccgaggctctatcaaaag
cccgccgtattacgcgatggccatgttcatcaccgagagatgctgccgcgaatttttgac
ggtgaaaaagagctgctggcggcggagtttatgccgctggtacagcagatggggttggcg
gaggcttacgatcgtcagctaatgcagcgcatcatggcgctctccgcctgttggccggaa
gagacgctggcggttccgctcactatcgattcgttattacagcctgcgtttcagcgaacg
ctgcgcgatatgctgctgcaatgtacaaaatcgcagcggcagcgttttttatttgaactt
gctgaggcagaagtgtgtcaacacttcaatcgtttgcaaccggcgctgcgattgctgaaa
ggttttggctgccgtttggccgtcagccaggccggattaacggtggttagcaccgcctac
attaccctggcgggcgttgagctgattaagctgcatccgggcctggtgcgtaatattgat
cgacgcactgaaaaccagctgtttgtgaagagtttactggaggtgtgtaccatgacgccg
gcgcaggttttcgccgcgggcgtcaggacgcgggaagagtggcaaacgctatcggcgctt
ggcgttgccggcgggcagggcgactttttctctacttcccagccggttaacagcaatgtg
aaaaaatattcgcaaagagttcgggtttag
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