Mixta hanseatica: K6958_02485
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Entry
K6958_02485 CDS
T08912
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mhan
Mixta hanseatica
Pathway
mhan02020
Two-component system
mhan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mhan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6958_02485 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K6958_02485 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhan03021
]
K6958_02485 (rpoN)
Transcription machinery [BR:
mhan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6958_02485 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
UQY44590
LinkDB
All DBs
Position
complement(527868..529301)
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDIHEEVDSRD
YVESEALDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGNDYRDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAIDDTGYLTVTLDEIRDSIGDEDVALDEVEAVLK
RVQRFDPVGVGARNLRDCLLVQLSQFARDTPFLAEAQLIVDQYLDLLANHDFRSLMRVTR
LKEDVLKTALALIQSLDPRPGQSVNTREPEYVIPDVLVRKTANRWTVELNGDSVPRLQIN
QQYAALGSSARSDSDSQFIRTNLQDAKWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGEE
FMRPMVLADIAQAVDMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLISAENPAKPLSDSKLTTLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagtcaacagcttgcgatgactccgcagctacag
caggcaattcgtttgctgcagctttctacgctggaacttcaacaggagatacagctggcg
ctggagagtaatccgttgcttgagcagaccgatatccacgaggaagtcgactcacgcgac
tatgtcgaaagcgaagcgctcgacacacgtgaggcgttggaacaaaaggatatgccggaa
gagttgccgcttgatgcaacctgggatgagatctataccgccggtacgccttccggcacc
ggtaatgattaccgcgatgacgaactaccggtttatcagggcgaaactacccagaccttg
caggattacctgatgtggcaggtagagctaacgccgtttagcgataccgaccgcgccatc
gccacctctatcgtcgacgccattgatgacaccggttatcttaccgttacgcttgatgag
atccgcgatagcatcggcgatgaagatgtggcgctggatgaggtcgaagcagtactcaaa
cgagtgcaacgtttcgatccggttggcgttggtgcccgtaacctgcgcgactgcctactg
gtccagctttctcaattcgcgcgtgatacgccctttttggctgaagcgcagctgattgtc
gatcagtacctcgatctgctggcgaaccatgatttccgcagcctgatgcgggtgacgcgc
ctgaaagaggatgtgttaaaaaccgcgctggcgctgattcagtcgctcgatccgcggccg
ggccagtcggtgaacacccgcgagccggaatatgtcattcctgatgtgctggtgcgcaaa
accgccaaccgctggaccgtggagttaaacggcgacagcgtgccgcgcctgcagattaat
cagcaatacgccgcgctgggtagctctgcgcgtagcgacagcgatagccagtttattcgt
accaatttacaggatgcgaagtggctgattaaaagcctggaaagccgcaacgatacgcta
ttgaaagtaacgcgctgtatcgttgagcagcagcaggctttttttgagcagggcgaagaa
tttatgcgcccgatggtgctggcggatatcgctcaggccgttgatatgcatgaatccacc
atttcccgcgttaccacccaaaaatatctgcacagcccacgcggcattttcgaactgaaa
tactttttctccagccatgtgaataccgagggcggcggcgaggcctcctcaaccgctatt
cgcgcgttggtgaaaaagctgatctcggcggaaaaccccgccaaaccactgagcgacagt
aagctcactaccctgttgtctgaacaaggcattatggtggcacgccgtaccgtcgcgaag
tatcgcgagtctttatccatcccgccatcaaatcagcgtaaacaattggtttga
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