Mixta hanseatica: K6958_04480
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Entry
K6958_04480 CDS
T08912
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhan
Mixta hanseatica
Pathway
mhan03030
DNA replication
mhan03430
Mismatch repair
mhan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6958_04480 (dnaE)
03430 Mismatch repair
K6958_04480 (dnaE)
03440 Homologous recombination
K6958_04480 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhan03032
]
K6958_04480 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhan03400
]
K6958_04480 (dnaE)
Enzymes [BR:
mhan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6958_04480 (dnaE)
DNA replication proteins [BR:
mhan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6958_04480 (dnaE)
DNA repair and recombination proteins [BR:
mhan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6958_04480 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UQY44951
UniProt:
A0ABY4RDZ9
LinkDB
All DBs
Position
964870..968352
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRIHSDYSMVDGLAKTGPLVKKTAALGMPAMAITDFTNLCGLVKFYGTAHGA
GIKPIIGADFLVASELMGDELTQITVLAMNNVGYQNLTLLISRAYQRGYGPEGPTIERDW
LADLQEGLILLSGGRRGDVGRSLLRGNQALVAQCLAFYQQHFPDRYYLELIRTGRPDEES
YLHAAVELAIAEGIPVVATNEVCFINEDDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSAEEMCELFSDIPEALENSVEIARRCNVTVRLGEYFLPQFPTGEMTTEDFLVKRSREGL
EERLEFLFPDAEERARKRVEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEHGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKQGEPPIDIAAIPLEDKKSFDML
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKDGYFRELFDLCARTDPKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEQSYASITPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKEMHPTERGKITTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREIMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRVSPCD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttattcatctgcgtatccacagcgattattcgatggtcgatgga
ctggcgaagaccggcccgctggtgaaaaaaaccgcggctctcgggatgccagcgatggca
atcaccgactttaccaacctgtgcgggctggtgaaattttacggtacggcgcacggcgca
gggattaaaccgattattggcgccgattttctggtcgccagtgagctaatgggcgatgaa
ctgacgcagattaccgtgctggcgatgaataacgtcggctaccaaaatctgacgctgctg
atttcacgcgcctatcagcgcggctatggcccggaaggcccgacaatcgaacgtgactgg
ctggccgaccttcaggaggggctgattctgctctccggcggacggcgcggcgatgtaggc
cgcagtctgctgcgcggcaatcaggcgctggtggcgcagtgtctggctttttaccagcaa
catttccccgatcgctactatcttgagctgatccgcaccgggcgtccggatgaagaaagc
tatctgcacgccgccgtcgagctggcgattgccgaaggcattccggtggtggcgaccaat
gaagtttgctttatcaacgaagatgacttcgacgcgcatgaaatccgcgtggcgatccac
gacggctatacgctggacgatcccaaacgcccacgtaattacagcccgcagcagtatatg
cgcagcgccgaagagatgtgcgagctcttttccgatatcccggaagcgctggaaaacagc
gtggaaatcgcgcgtcgctgcaacgtcaccgtgcggctgggcgaatacttcctgccgcaa
ttccccaccggggagatgaccaccgaagattttctggtgaagcgttcgcgcgaagggctg
gaagagcgccttgagtttctgtttcccgatgcggaagagcgggcgcgcaagcgggtggaa
tatgacgagcgtctggagatcgaacttaacgttatcaaccagatgggcttccccggctac
tttctgatcgtgatggagtttatccagtggtcgaaggataacggtatcccggtggggccg
gggcgtggctcaggcgccggttcgctggtggcctacgcgctgaaaattaccgatctcgat
ccgctggaatttgacctgctgtttgaacgcttcctgaacccggagcgcgtatcgatgcct
gacttcgacgtcgacttctgtatggagaagcgcgatcaggttattgagcacgtcgccgat
atgtatgggcgcgatgcggtatcgcagatcattaccttcggcaccatggcggcgaaggcg
gttatccgcgacgtgggccgcgtgctggggcatccctatggcttcgttgaccgtatctct
aagctggtgccgcccgatccgggcatgacgctggagaaagcgtttgccgccgagccgcag
ctgccggaaatctacgaggcggatgaagaggtcagggcgctgatcgatatggcgcgcaag
ctggaaggggtcacgcgtaacgccggtaagcatgccggcggcgtggtgatcgcgccaact
aaaattaccgacttcgcgccgctttactgtgatgagcatggtaaccatccggttacccag
tttgataaaaacgatgtggaatatgccgggctggtgaagttcgacttccttggcctgcgt
accctgacgatcatcaactgggcgctagagatgatcaacgcgcgccgggcgaagcagggc
gagccgccgatcgatatcgccgcgattccgctggaagataaaaaaagttttgatatgctg
cagcgcgcggaaaccacggcggtgttccagctggaatcgcgcggcatgaaagacctgatt
aaacgtctgaagccggactgctttgaagatatgatcgcgctggtggcgctgttccgtccc
ggcccgctgcagtcggggatggtggataacttcattgaccgtaaacatggccgtgaagcg
atctcctatcctgatattcagtggcagcacgaatccctgaaaccggtgctggagccgacc
tacggcattattctgtatcaagaacaggtgatgcagatcgcccaggtgctggcgggctat
acgctcggcggcgcagatatgctgcgccgtgccatgggtaagaaaaagccggaggagatg
gccaagcagcgttccgtgtttaaagagggcgcggaaagcatgggcatcgacggcgagctg
tcgatgaaaatcttcgatttggtggaaaaattcgcaggttacggcttcaataaatcacac
tccgctgcctatgcgctggtttcttaccagacgctgtggctgaaggcgcactatccggcc
gagtttatggcggcggtgatgactgccgatatggacaacaccgagaaagtcgtcggcctg
gtggacgagtgctggcgtatggggctgaaagtactgccgccggatatcaactccggcctc
tatcagttccacgtcaatgatgacggtgaaatcgtgtatggtatcggcgcgatcaaaggc
gtcggtgaaggcccgatcgaagcgattatcgaagcgcgtaataaagatggctatttccgc
gagctgttcgatctttgcgcgcgcaccgatccgaaaaaaattaaccgtcgggtgatggaa
aaactgatcatgtccggcgcgtttgatcgcctgggaccgcaccgcgccgcgctgatgagc
gcgctgggcgatgcgctgaaggcggcggatcagcatgcgaaagcggaagcgatcgggcag
gcggatatgtttggcgtgctggcggaagagccggaacaggtagagcaatcttacgccagc
attacgccatggccggaacaggtgcagctggatggcgagcgcgagacgttgggtctctat
ctcaccggccatccgataaatcagtacctgaaagaaattgagcgctacgtgggtggcgtt
cgcctgaaagagatgcatccaaccgagcgcggtaagattaccaccgcggccggtttggtg
gtggcggcccgcgtgatggtcactaaacgcggtaaccgtattggcatctgcacgctggat
gaccgttccggtcgtctggaagtgatgttgttcacagatgcgcttgataaataccagcag
ctgctggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgattttagc
ggtgggcttaaaatgaccgctcgcgaaattatggatatcgatgaggcacgtgaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtctctggaaccccatcgttcggggacaattccggtacatctctactatcag
agagcggatgcgcgggctaagctgcgttttggcgcagcctggcgcgtatctccctgcgat
cgtttgctaaatgacctgcgatcgctgataggatcggagcaggtggaactggagtttgac
taa
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