Mixta hanseatica: K6958_07190
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Entry
K6958_07190 CDS
T08912
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mhan
Mixta hanseatica
Pathway
mhan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6958_07190 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhan03019
]
K6958_07190 (rhlE)
Enzymes [BR:
mhan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K6958_07190 (rhlE)
Messenger RNA biogenesis [BR:
mhan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6958_07190 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
UvrD-helicase
Mucin-like
Motif
Other DBs
NCBI-ProteinID:
UQY45436
UniProt:
A0ABY4REX6
LinkDB
All DBs
Position
1471374..1472903
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AA seq
509 aa
AA seq
DB search
MSFDSLGLNADILRAVAEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPIL
QRLSAKPLAAKSRRPVRALILTPTRELAAQVGENVRDYSKYLNLRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLARLPAK
RQNLLFSATFSDEIKALAEKLLDNPSQVEVARRNTASEQITQHVHFVDKKRKRELLSLLI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALSDFKGGQIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEAISLVCVDEHKLLRDI
ERLLKREIPRMAQPGFEPDPSIKAEPIINGRQQRGGGGGGRGQGGRAQSGARQPSAQRQA
GAGDRQPRRAAGERDGNAPRRASGDNSQPRRAAGERDGNAPRRASGDSSPSRRTSGDNSH
PRRLSGDGNQPRRSSGQRPARSDKPSGNR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattctctcggcctgaacgccgatattttgcgtgccgttgccgagcaaggc
tatcgcgagcctacccctgtacaacgccaggcgatcccggtggtactggaaggccgtgac
ctgatggccagcgcccaaaccggcaccggcaagacggcaggctttacgctgcctattctg
cagcgcctgagcgcgaaaccgttagcggcgaaaagccgtcgcccggtacgcgccttaatt
ctcaccccgacgcgtgaactggcggcgcaggtgggtgaaaacgtccgtgattacagtaaa
tatctgaacctgcgttcgctggtagtattcggcggcgtcagcattaacccgcagatgatg
aaactgcgcggcggcgtagatgtgctggtggcgacgccgggccgcctgctcgatctggcg
cagcaaaacgcagttgacctgtcgcaggtggaaatcctggtgctggatgaagcggaccgt
atgctcgatatgggctttatccatgatattcgccgtgtactggcgcgcctgccggcgaaa
cgtcagaacctgctgttttccgccaccttctctgatgagattaaagctctggccgagaag
ctgctggataaccccagccaggtagaagttgcgcgtcgcaacaccgcctctgagcagatt
acccagcacgtgcactttgttgataagaagcgcaagcgggaactgctgtcgctgctgatc
ggtcagggtaactggcagcaggtgctggtgtttacccgcaccaagcatggcgctaaccac
ttagccgagcagctgaataaagatggcatcaccgccgccgcgatccacggtaataaaagc
cagggcgcgcgtacccgtgcgctgagcgactttaaaggcggccagattcgcgtgctggtc
gcgaccgatatcgccgcgcgcggtctggatatcgaagagctgccgcacgtggttaactat
gagctgccgaacgtaccggaagattatgtgcaccgtatcggccgtaccggtcgtgccgcc
gctaccggcgaagcgatttcgctggtctgcgtggatgagcacaagctgctgcgtgatatc
gagcgtttgctgaagcgtgaaattccacgcatggcgcagccgggctttgagccggatccc
agcattaaggctgaaccgatcatcaatggtcgtcagcagcgtggcggcggcggcggcgga
cgtggccagggcggtcgcgctcagagcggcgctcgccagccttcagctcagcgtcaggcc
ggtgcgggcgatcgtcagccgcgtcgtgccgctggcgagcgtgatggcaacgcgccgcgc
cgcgcttctggcgataacagccagccgcgtcgtgccgctggcgagcgtgacggcaatgcg
ccgcgccgcgcttccggcgatagcagcccgtcacgtcgtacctccggcgacaacagccat
ccgcgccgactgtctggcgacggcaatcagccgcgccgctcatccgggcagcgcccggcg
cgcagcgataagccttccggcaatcgttaa
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