Mixta hanseatica: K6958_11120
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Entry
K6958_11120 CDS
T08912
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
mhan
Mixta hanseatica
Pathway
mhan02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mhan00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6958_11120 (pdeR)
Enzymes [BR:
mhan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
K6958_11120 (pdeR)
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
Motif
Other DBs
NCBI-ProteinID:
UQY42505
UniProt:
A0ABY4R6Z0
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All DBs
Position
2308441..2310426
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AA seq
661 aa
AA seq
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MLEDQGQTLLFTLFGTRSPYWQLTSDSDALKLSREELAETSLAVPLTASQAQLLRAMTVV
TTSVNLVINLRGEELPMHFVGRKVNQGEWAGTASAWGDTSSVARDLTQGLSFAEQVVSEA
NSVIVILDQNGNIQRFNRLSEEYTGLKEQEVIGRNVFQLFMTRQEAVASRRNITGFFRDG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD
TITGLPNRNAIHQRISEVLEKREQQQIGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAV
LTCLESQQTLGRLGGDEFIVLAENSSQTALEAMALRILTRLRQPFRIGLIEVYTGCSLGI
ALAPQHGEDRESLIRNADTAMYHAKESGRGQACVFSAEMNQRVFEYVWLDTNLRKALEQQ
QLIVHYQPKISAGDVVTGAEALVRWLSPERGLIPPNEFISYAEESGLIVPLGRWVMLTVL
QQIVAWRRQGIYLRVAVNVSARQLIDQSIYNDLKQALQLNGMSTSPIDIELTESCLIENE
QQTLALMHQFRELGAEVHLDDFGTGYSSLSQLARVPIDAIKLDQSFVRDVYKQPIAQSLV
RAIVAVAKALNLRVIAEGIENQQEEAFLLDNEVDERQGYYYAKPMPADKMEHWLAQRPAR
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagatcagggtcaaacattgctctttacactgtttggtacccgtagcccttac
tggcagcttacctccgacagtgatgccctaaaactttcccgggaagaactggcggaaacg
agcctggccgtcccactcaccgcttcgcaggcgcagctgctgcgtgccatgacggtggtc
accaccagcgtaaacctggtgataaatttgcgtggcgaagaattaccgatgcattttgtc
ggacgtaaagttaatcagggagaatgggccggcaccgcgtcggcatggggtgatacctcc
tccgtggcgcgcgatctcacccaggggctctccttcgccgagcaggtcgtttcagaagcc
aactcggttatcgtcattctcgatcagaacggcaacattcagcgctttaaccgcctcagt
gaggagtacaccggtttaaaagaacaggaagttatcggtcgcaatgtgtttcagcttttt
atgacccgtcaggaggcggtggcctcacgccgcaacataaccggttttttccgtgacggc
agttcgtatgaagtggaacgctgggttaaaacccgtaagggccagcgcctgtttctgttc
cgcaataaattcgtgcacagcggcagcgggaaaaatgaaatatttctgatctgttccggc
accgatattaccgaggaacgtcgggcccaggaacgcctgcgtattctggcgaataccgat
accattaccggcctgccgaatcgtaacgctattcatcagcgtattagcgaagtgctggaa
aaacgtgaacagcaacagatcggcgtggtctatctggacctcgataattttaaaaaggtt
aacgacgcctacggtcatatgtttggcgatcagctgttgcaggcggtatcgctggcggta
cttacttgcctggagtcccagcaaacgttgggccgtcttggcggcgatgagtttatcgta
ctggcggaaaacagttcgcaaaccgcgctggaagcgatggcgctacgtattttgacgcgc
ctgcgccagcccttccgtatcggcctgattgaagtctataccggctgttcgctgggcatc
gcgctggcgccgcagcatggggaggatcgcgaaagcctgatccgcaatgccgatactgcg
atgtatcacgccaaagagagcggccgcggtcaggcctgtgtcttttccgctgagatgaat
cagcgcgtctttgaatatgtctggctggataccaatttgcgcaaagcgctggagcaacag
cagctgattgttcactatcagcctaaaatcagtgctggtgacgttgtaacgggcgccgaa
gcgctggtgcgttggctttcaccggagcgcggcctgattccgcccaatgaatttatctct
tacgctgaggagtcgggtttgatcgtgccgcttggccgctgggtcatgcttacggtgctc
cagcaaattgtcgcctggcgtcgccaggggatctatttgcgcgtggcggtcaatgtttct
gcgcgccagctgatcgaccaaagcatctataacgacctgaagcaggcgctgcagctgaac
ggcatgagcaccagcccgattgatattgagctgacggaaagctgtttgattgaaaatgag
caacaaacgctggccttaatgcatcaattccgcgagctgggcgccgaggtacatctggat
gattttggcaccggctactcatcgctgtcacagctggctcgcgtgccgattgacgctatc
aaactggaccaaagctttgtccgtgatgtctacaaacagccgattgcccagtcgctggta
cgggcgattgtggcggtggctaaagcgctgaatctgcgggtgattgctgaaggcattgag
aaccaacaggaagaggcgtttttgctggataacgaggtggacgaacgtcagggctactat
tatgcgaagccaatgcccgcagataaaatggagcattggcttgctcagcgtcctgccaga
tcctaa
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