Mixta hanseatica: K6958_18500
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Entry
K6958_18500 CDS
T08912
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mhan
Mixta hanseatica
Pathway
mhan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K6958_18500 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhan03400
]
K6958_18500 (uvrA)
DNA repair and recombination proteins [BR:
mhan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K6958_18500 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6958_18500 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
nSTAND3
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
UQY43817
LinkDB
All DBs
Position
3897156..3899987
Genome browser
AA seq
943 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHGVPLAAQTVSQMVDNVLAQPEGARLMLLAPVVKDRKGEHTKTLENLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLATRLAESFETALELSGGTAIVADMDDA
DADELLFSANFACPICGYSMSELEPRLFSFNNPAGACPTCDGLGVQQYFDPERVVQNAEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHLKFDVEAPFNTLSEKAQQVILYGSGKESIEFKY
INDRGDTSVRRHPFEGVLHNMERRYKETESSAVREDLAKFISNRACATCEGTRLRREARH
VYVEDTTLPTISDMSIGHAMDFFRNLKLSGQRAKIAEKVLKEIGDRLSFLVNVGLNYLSM
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVVAEGTAEEIMQVEESLTGQYLSGKRKIAV
PEQRVPADPTKVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYREVTGMENFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE
SRSRGYNPGRFSFNVRGGRCEACQGDGVLRVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQLLLTVLHQLRDQGNTIVVIEHNLDVVKTADW
IVDLGPEGGSGGGQILVAGTPETVAKCEESHTARFLKPLLEQR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaagtccggggtgctcgcacccacaacctgaaaaacatcaacctgatc
atccctcgcgacaaactgatcgttgtcaccggcctgtcaggttccggtaaatcctcgctg
gcgttcgatacgctgtatgctgagggacaacgccgctacgtggaatcgctttccgcctat
gcgcgtcagtttctttcgctgatggaaaaaccggatgtcgatcatatcgaaggcctgtcg
ccggcgatttcgatcgagcagaaatcaacgtcccataacccgcgatcgaccgtgggcacc
atcaccgaaattcacgactacctgcgcctgctgttcgctcgcgtcggcgagccgcgctgc
cccgatcacggcgtaccgctggcggcgcaaaccgtcagccagatggtggataacgtgctg
gcccagccggaaggcgcacgcctgatgctgctggcaccggtagtgaaagatcgtaaaggc
gaacataccaaaacgctggagaatctggcgacgcagggttatatccgcgcgcgcatcgat
ggcgaagtgtgcgatctttccgatccgccgaagctggaactgcaaaagaaacacaccatc
gaagtcgttatcgatcgctttaaggtccgcgaagatctggcgacgcgactggcggaatcg
tttgaaaccgcgctggagctttccggcggtacggcgatcgtcgccgatatggatgacgcc
gatgcggatgaactgctgttctccgctaacttcgcctgtccgatttgcggctacagcatg
agcgagctggagccgcgcctgttctcgtttaacaacccggcaggcgcctgcccgacctgc
gacggccttggcgtacagcaatatttcgatcctgagcgcgtggtgcaaaatgccgagcta
tcgctggccggcggcgcgatccgcggctgggatcgccgtaatttctactatttccagatg
ttgcgttcgctggcagaacatctgaagtttgatgtggaagcgccgttcaataccctgagc
gagaaagcgcagcaggtgatcctgtatggatcaggcaaggaaagcatcgaatttaaatat
attaacgatcgcggcgatacctcggtgcgccgtcatccgttcgaaggcgttctgcataat
atggaacgccgctataaagagacggagtccagcgcggtacgcgaggatctggcgaagttt
attagcaaccgcgcctgcgccacctgcgaggggacgcgtctgcgtcgcgaagcgcgtcat
gtttacgtggaagacactacgctgccgaccatctcagatatgagcatcggtcatgcgatg
gactttttccgcaacctgaagctgagcggccagcgtgcgaaaatcgccgagaaagtgctg
aaagagattggcgaccgcctgagtttcctggtgaatgtcggtctgaactatctctctatg
tcgcgttcggcggagacgctctccggcggcgaggcgcagcgtattcgtctggccagccag
atcggcgctggcctggtcggcgtaatgtacgtgctggatgagccctctatcggtctgcat
cagcgtgataacgaacgcctgctggaaacgctgattcatctgcgcaacctcggcaatacg
gtaattgtggtcgagcacgatgaggacgccattcgcgccgctgaccatattatcgatatc
gggccgggcgccggcgtgcacggcggtcaggtagtggcggaaggcaccgctgaagagatt
atgcaggtagaagagtcgcttaccggccagtatctgagcggcaagcggaaaatcgccgta
ccggagcagcgtgttcccgccgatcccacgaaggtgctgaagctgagcggcgcgcgcggc
aacaacctgaaagacgttacgctaacgctgccggttggactgtttacctgtattaccggc
gtttccggctccggtaaatcgacgctgattaacgatacgctgttccctatcgcccagcgt
cagctgaacggggcgaccattgccgaaccggcgccttaccgcgaagtaaccggtatggag
aacttcgataaggttatcgatatcgatcaaagcccgattggccgtacgccgcgttcaaac
ccggcgacctataccggcatctttacgccgattcgcgaactgtttgcgggcgtgccggag
tcgcgctcacgcggctataacccgggacgctttagttttaacgtgcgcggcgggcgctgc
gaagcctgtcagggcgacggcgtactgcgcgtagagatgcacttcctgccggacatttat
gtgccgtgcgatcagtgtaaaggcaagcgttataaccgtgagacgctggagattaaatat
aaaggcaaaagcattcatgaagtgctggatatgaccatcgaagaagcgcgcgagttcttt
gatgccgtgcctgcgctggcgcgtaagctgcaaacgctgatggatgtgggcctttcctat
attcgccttggtcagtcggcaaccacgctgtcgggcggcgaggcgcagcgcgtgaagctg
gcgcgtgagctgtcgaagcgcggcaccggccagacgctctatatccttgatgagccgacc
accggcctgcactttgccgatattcagctgttgctgacggtgctgcatcagctccgcgat
cagggcaataccatcgtggtgattgagcataacctcgacgtggtgaaaaccgctgactgg
attgtcgatctcggtccggaaggcggcagcggaggcggacagatattggtcgccggtacg
ccggaaaccgtcgccaaatgtgaagaatcccatacggcccgcttcctgaagccgctgctg
gaacaacgttaa
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