Mannheimia haemolytica D174: J451_01060
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Entry
J451_01060 CDS
T02748
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mhao
Mannheimia haemolytica D174
Pathway
mhao03410
Base excision repair
mhao03430
Mismatch repair
mhao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J451_01060
03430 Mismatch repair
J451_01060
03440 Homologous recombination
J451_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhao03400
]
J451_01060
DNA repair and recombination proteins [BR:
mhao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J451_01060
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J451_01060
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J451_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AGQ40187
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All DBs
Position
186096..187817
Genome browser
AA seq
573 aa
AA seq
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MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNLHRPQQLANIEQAVDLL
LQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYLIPDRFSQGYGLSVAVAEM
VLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLPPESLPNADALVNPNLAFCEF
PSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAELLDLVALGTVADVVPLDQNNRI
LVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAADLGFAIAPRLNAAGRLENMSLGVEL
LICENMELARRLALDLDSLNQTRKEFEQEMKAEALSICANLPSLAQSEQAHGIVLYQADW
HQGVIGILASRIKDQFNRPVIAFAQESEESEYLKGSARSINGVHMRDLLEHIDMRHPDLI
EKFGGHAMAAGLTIHQSKLDLFKQIFDQSINAIIEPEQLQGIIYTDGELNALEFTLANAE
MIRQGGPWGQHFPEPSFEGEFSILQQKLLAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPD
LSIKKARLVYRLDINEFRGEKSLQLKVEYLKYI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaataattaaaaggcgcccattattaacaacggaaatagtctctacaaacccg
ttattaaatcgaatctatcaaagtcgaggcataaagaatacgcaagaactagagcataat
ttaaagaatttgcatagaccacagcaacttgccaatattgagcaagccgttgacttgcta
ttacaagcctttcgtgaaaaaagccggatcattattgtgggtgattttgatgcagatggt
gcaaccagtacatcgcttgcccttattgcgttacgccaattgggtttcgataaggtagat
tatttaattccggatcgtttttctcaggggtacggattgagtgtagcggttgctgaaatg
gtattagcaaaaggggcggatttagtcttaacggtagataatggaatttcttcgactgaa
ggcattgctctgctaaaaagccatcagattcaagttttggttaccgatcatcatttaccg
ccagagagcctacccaatgcagatgcactggtaaaccccaatttagctttttgtgaattt
ccgtctaaatctttagccggggtaggcgtgatcttctatgtaatgatggcattgcgttct
cgtatgagagaacaacatttatttgaaaataaaccagagccaaattttgctgaattactg
gatttagtcgctttaggcacagtggctgatgtagtgccgttagatcaaaataatcggata
ttggtgcatcaagggttacagcgaatccgttcagggcattgccgtttagggataaaagct
ttagcggaggtgggcaagcgagatctttctactttgcaagcagcagatttgggttttgct
atcgcaccacgtttgaatgcagctggtcggttagaaaatatgtctttaggggttgagtta
ctaatttgtgaaaatatggaattagctcgccggcttgcgcttgatcttgattctcttaat
caaacccgaaaagagtttgaacaagaaatgaaagcagaagcactgtcgatttgtgcgaat
ttgccaagtcttgcgcagtctgaacaggcacacggaatagtgttatatcaagcagattgg
caccaaggtgtaattgggatcttagcttctcgcattaaagatcaatttaaccgtcctgtc
attgcttttgcacaagaaagtgaggaaagtgaatatctaaaaggttctgctcgctcgatc
aacggagtacatatgcgagatttactggaacatatcgatatgcgacatccagacttgatt
gaaaaatttggtggacacgcaatggcggctggtttgactatccatcaatcaaaattagat
ttatttaaacagatatttgaccaatctattaatgcaattatcgagcctgagcaattacaa
ggcatcatttataccgatggtgagttaaatgcactagagtttactttagccaatgccgag
atgattaggcaaggtgggccttggggacaacattttccagaacctagttttgaaggggag
tttagcattctccaacaaaaattactcgcaggtaaacatttaaaattaatgttgcaatca
gagaaagggcaactatttgatgcaatttggtttaatgtggatgtaagggcgtttcctgac
ttatcgatcaaaaaggcaagattagtttataggttggatattaatgaatttcgaggagag
aaatctttgcaattaaaagtggagtatcttaaatatatttga
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