Mannheimia haemolytica D174: J451_01415
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Entry
J451_01415 CDS
T02748
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mhao
Mannheimia haemolytica D174
Brite
KEGG Orthology (KO) [BR:
mhao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhao03016
]
J451_01415
Enzymes [BR:
mhao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
J451_01415
Transfer RNA biogenesis [BR:
mhao03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J451_01415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGQ40226
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All DBs
Position
complement(239085..241061)
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AA seq
658 aa
AA seq
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MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYFIPPAEMKKVMHGDSVK
AVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIKQTIPANTHKKATE
KLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEKN
YELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIKQNGKRTGWRLVVAIADPTAYIP
ENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLNGNLIK
ETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQSEETKQQIEWLHQFTQARIQWRAENA
LLFKEQGDYTFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSQHAKTGVFNT
HSGFDPKNYELVKSFLLQTLASDENRDELAERYSAERLATLEGYCQMQRDIQDYPEKFLE
LRLRRYLTFAEFKAEVAPHFGLGITDYATWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEE
SVLSRLQEARRQNRLVERDIADWLYARYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGA
QIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaatccccttttagcccaactcaaacaacaaattgaagcaagcaaagaa
tatgtcgcaggcgttgtcaaagcctcagacaaagcattcggttttttagaatgcgataaa
aaaagctattttattccacctgcggaaatgaaaaaagtaatgcacggtgattcagtgaaa
gccgtagtcaaacgtgatggcgacaaagaacaggtagaaattgattcactacttgagcca
atgctggatagatttattgcccaagttcgcttgaataaagagggcaaattgcaacttgcg
gttgatcacccaagcattaagcaaactatcccggcaaatacccataaaaaagccactgaa
aaattagaaaatggcgactgggtggttgcacaattaaaaacgcacccattgcgtgacgac
cgttttttctttgctcaagttacccaatttatctgtaaagaatctgataattttgcccct
tggtgggtcacacttgcccgccacgaacagcctcgtgaaccggtcgcaaatgaaaaaaac
tatgaattacacgatgaattagctcgtgaagatttatctcatctttactttaccactatt
gacagcccaagcacgcaagatatggacgatgctctgttcatcgaaccaattaagcaaaat
ggcaagcgaaccggctggcgtttagtggtagcgattgctgacccaaccgcttatatccca
gaaaattcccatattgaaaaagccgctcgccagcgttgtttcaccaactatttgccgggc
tttaacattccaatgttacctcgagaactctcagacgatctctgttcgcttgtcccgaat
gaaaaacgccctgccctcgttggctttattgaaaccgatttaaacggcaatctcattaaa
gagacaacctttacctctgcttgggtcgaatcaaaagatcgcttggcttacgacgatgtt
tccgattatctcgaaggcgtggaaaatgcgtggcaacctcagtctgaagaaacaaaacaa
caaattgagtggctacatcaatttactcaagcccgcattcaatggcgtgccgagaatgcg
ttgctattcaaagaacaaggcgattatacctttgagttaaatgaagatggctcggtaaaa
gatattcacgttgaatatcgccgtattgcgaatcaaatgatcgaagaatcaatgattctt
gccaatatttgttgtgcaaaattcttaagccaacatgccaaaaccggtgtatttaatacc
cattcaggttttgatccgaaaaattatgaattggtaaaatcatttttactccaaacttta
gccagcgatgaaaatcgtgatgagcttgccgaacgctactccgccgagcgtttagcaacc
ttagaaggctattgccaaatgcaacgtgatattcaagactacccagagaaattcttagag
ttgcgtttacgacgttatttaaccttcgctgaatttaaagccgaagttgccccgcatttc
ggactaggcattaccgattacgccacttggacatcacccatccgtaaatatggcgatatg
gtaaaccaccgtttaatcaagcaagtgttacttggcaaacaaagccaagcggtggaagaa
tcagttttaagccgtttacaagaagctcgccgtcaaaaccgtttagtagaacgtgatatt
gctgactggctttatgctcgttaccttgccccaatggtggaacaagcggtcgaatttgag
tgcgaaattgcagatgtttcccgtggtggcttgcgtgcgaaagtcataaaaaacggtgct
caaatttttgtgccattctccagcttgcacgacaacaaagaggaaatggaataccgccaa
gaagaacttgcactttatattaaaggtgaaaaagcctatcagatcgggcaagcggtgaaa
gtgaaactcaccgaagtacgcttagaaacccgctcaatcgtaggaaatatcatttaa
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