KEGG   Mannheimia haemolytica D174: J451_06550
Entry
J451_06550        CDS       T02748                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
mhao  Mannheimia haemolytica D174
Pathway
mhao02024  Quorum sensing
mhao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J451_06550
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    J451_06550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhao03019]
    J451_06550
   03036 Chromosome and associated proteins [BR:mhao03036]
    J451_06550
Messenger RNA biogenesis [BR:mhao03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     J451_06550
Chromosome and associated proteins [BR:mhao03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    J451_06550
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Gag_p24_C
Other DBs
NCBI-ProteinID: AGQ41153
LinkDB
Position
1259386..1259658
AA seq 90 aa
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARALSHNNNNQAQHAQPAAEVTEQAE
NT seq 273 nt   +upstreamnt  +downstreamnt
atggcaaaaggtcaatctttacaagatccatatttgaatgcacttcgtcgtgagcgtatt
cctgtttcaatttatttagttaacggcattaaattacaaggtcagatcgagtcgttcgac
caatttgtgattttattaaaaaacactgtaagccaaatggtgtataaacacgctatttca
acggttgttcctgcccgtgcgttatcgcataacaataacaaccaagcccaacacgctcag
cctgctgccgaagtaactgaacaagcggaataa

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