Miniphocaeibacter halophilus: JFY71_02760
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Entry
JFY71_02760 CDS
T08075
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhap
Miniphocaeibacter halophilus
Pathway
mhap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JFY71_02760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhap03019
]
JFY71_02760
03009 Ribosome biogenesis [BR:
mhap03009
]
JFY71_02760
Enzymes [BR:
mhap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JFY71_02760
Messenger RNA biogenesis [BR:
mhap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JFY71_02760
Ribosome biogenesis [BR:
mhap03009
]
Prokaryotic type
rRNA helicases
JFY71_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QQK08475
LinkDB
All DBs
Position
complement(579560..581245)
Genome browser
AA seq
561 aa
AA seq
DB search
MTEKKIEDFNLSKEVMKAVSDMGFEEFSPIQAQAIPYLMEGEDVIGQAQTGTGKTAAFGI
PIVEKVDSKLNKVQAIVLCPTRELCIQVSEEISKLAKYKKDLKVLPIYGGQPIERQLRAL
KKGVQVVIGTPGRVIDHIKRKTLKLDNVNIFVLDEADEMFDMGFREDIELVLGSVSDHRQ
SLFFSATMDKNIMKFAKKFQNEPKIVKVVNKELTVPKVTQFYYELKNNIKIEVLSRILDI
YNPKLTVVFCNTKKMVDELTGELQGRGYFADGLHGDLKQVQRDVVMNKFRKGTIDILVAT
DVAARGIDVDDVDLVVNYDMPQDNEYYVHRIGRTARAGREGTAISFVTNRDYSMLREIEK
YTKTSIERRALPTLKDIEAKQSSKIIEKLRKILDGGNLEKQIEIIGLLEGEDYSSNHIAA
ALLKLYMRDNRLEGHQEIDSVDNNKKASFGRDKGRKDDRRDRRDRRGKDGRTERKPNRKL
KNSTRLFLNTGKRKGVSQKHILSALCNDAGIAAKEVGDIDIYDKFTFVDVDNKVADKVVK
KLNNKHIKGSKVSVEKANKKI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaagaaaattgaagattttaacctatcaaaagaggtaatgaaagctgtttcc
gacatgggatttgaagaattctctccaatacaagctcaagctataccttatttgatggaa
ggagaagacgtaattggtcaagctcaaacaggaacaggaaaaacagccgcttttgggatt
cctattgtcgaaaaagttgattcgaaattaaataaagttcaagcaattgtactttgtcca
acaagagaattatgtattcaagtatctgaagaaatttcaaaattagcgaaatataagaaa
gatttgaaagtattgcctatatatggtgggcaaccaattgaaagacaattaagagcgtta
aaaaagggagttcaagtagttataggaacacctggtagagtgatagatcatataaaaaga
aaaacattaaaattggacaatgttaatatatttgtattagacgaagccgatgaaatgttt
gatatgggatttagagaagatatagaactagtattaggtagtgtatctgatcatagacaa
tcattgttcttttcagcaacaatggataaaaatattatgaaatttgcgaaaaaatttcaa
aatgaacctaaaatcgtaaaagtagttaataaggaattaacagtacctaaggtaactcaa
ttttattatgaattaaagaataatataaaaatagaagtattatctagaatcttagatatt
tataatccaaaattaactgtagtattttgtaatactaaaaaaatggtagatgaacttaca
ggagagttacaaggtagaggttactttgctgacggattacatggtgatttaaagcaggta
caaagagatgttgtaatgaataagttcagaaaaggtactatagatattttagtagcaaca
gacgtagcagcaagaggcattgatgttgatgatgtagacttagttgttaactacgacatg
ccacaggacaatgaatattatgttcatagaattggaagaacagccagggctggtagagaa
ggtacagctataagttttgtaacaaacagagattatagtatgttaagagaaattgaaaag
tacactaaaacttctatagaaagaagggccttacctacattaaaggatattgaggcaaaa
caatcatctaaaattatagaaaagcttagaaaaattcttgatggtggaaatttagaaaaa
caaattgaaattataggtcttttagaaggcgaagattatagttcaaatcatatagcagca
gcattattgaaactatatatgagagataatcgcttagaaggacatcaagaaatagacagt
gtcgataacaataaaaaagcttcctttggcagagataagggaagaaaagacgatagaaga
gacagaagagatcgtcgtggaaaagatggaagaacagaaagaaaaccaaatagaaaatta
aaaaattctacaagactcttccttaatacaggaaaaagaaaaggtgtatctcaaaagcat
atactttcggctttatgtaatgatgcaggaattgcagcaaaagaagttggagatatagat
atttacgataaatttacatttgtagatgtagacaataaagtagctgataaagttgttaag
aaacttaacaacaagcatataaaaggatctaaagtatctgtagaaaaagctaataaaaaa
atataa
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