Miniphocaeibacter halophilus: JFY71_05040
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Entry
JFY71_05040 CDS
T08075
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mhap
Miniphocaeibacter halophilus
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhap03021
]
JFY71_05040
Transcription machinery [BR:
mhap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JFY71_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_3
KORA
Sigma70_ECF
MarR
HTH_Tnp_1_2
Phage_antitermQ
NirdL-like_HTH
HTH_6
P3A
GerE
HTH_VMAP-M9
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QQK08904
LinkDB
All DBs
Position
complement(1038114..1038884)
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AA seq
256 aa
AA seq
DB search
MSNNNRQAEQQEIKNLFKIYSETRDKEIRDTLIEKNLYIAEILAKKYVNKGIEYDDLLQV
ASIGLILAIERYDISKGFEFSSYATPTIVGEIKKYFRDKGWVIRVPRRIQELSKKVNNAK
TTLSQNLQRSPTIKDIAEYLEITEEEVIEAMEGSRVYAPQSLDISFDSQNDDKDVNLQDL
IGEEDDDFAKIELKDFIEKTMEKLNEVEKKILIDRYFEKKTQVSIAKELKISQMTVSRME
KKIIEKFRKELEETNS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataataacagacaagcagaacaacaagagattaaaaatctgtttaaaatatat
agtgaaactagagataaggaaattagagataccttaattgaaaaaaatttatatatagct
gaaatattggcaaaaaaatatgtaaataaaggaatagagtatgacgatttattgcaagta
gccagtattggcttaattcttgcaatagaaagatacgatattagtaagggatttgagttc
tctagttacgctactcctacaatagtaggtgaaataaaaaaatattttagagacaagggt
tgggtaattagagttcctagaagaattcaggaattatctaaaaaagttaataatgctaaa
actacattaagtcaaaaccttcaacgttctccaacaattaaggatattgcagagtattta
gaaataacagaagaggaagttatagaggcaatggagggaagtagagtttatgctccccag
tctttagatatttcctttgattctcaaaatgatgataaagatgtaaatcttcaagattta
attggagaagaagacgatgactttgcaaaaatagagcttaaggattttattgaaaaaacc
atggagaaactaaatgaagttgaaaagaaaatattaatagatagatattttgaaaagaaa
actcaagtttccattgcaaaagaattaaaaataagtcaaatgaccgtttcaagaatggaa
aagaaaattatagaaaaatttagaaaagaacttgaagaaaccaatagttaa
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