Miniphocaeibacter halophilus: JFY71_09745
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Entry
JFY71_09745 CDS
T08075
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mhap
Miniphocaeibacter halophilus
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JFY71_09745 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhap03021
]
JFY71_09745 (rpoD)
Transcription machinery [BR:
mhap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JFY71_09745 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QQK07567
UniProt:
A0AC61MPS3
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All DBs
Position
1958725..1959912
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AA seq
395 aa
AA seq
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MSDNNSIKDFDEISIEIDEIKKDIIEELISLASDNDGLITEEQFKAVESYSELSEEDIED
IEKKLVEENIELVKDRAHIEKENLDDDEDLKDDADEEDEKDEPSEEVEIKVDDLSNIKGL
NVDDPVKMYLKEIGKIPLLTAEEEVDLAKRMEAGDNYAKKRLAETNLRLVVSIAKRYVGR
GMQFLDLIQEGNLGLMKAVEKFDYKRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMV
ETINKLVRIERQLIQELGRDPTNEEIAKEMGIEVEKVREVRKIAQEPVSLETPIGEEEDS
HLGDFIEDETAIAPDEAANFTMLREQLNEILGTLNDRERKVLELRFGLTDGTPRTLEEVG
KEFNVTRERIRQIEAKALRKLKHPSRSQKLKDFLE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaataattcaattaaagattttgatgaaataagtatagaaatagatgaaata
aagaaagatattattgaagaattaattagtcttgcttcagataatgatggtttgattaca
gaagagcagtttaaagcagttgaatcctattcagaattatcagaagaagatattgaagat
attgaaaaaaaactagtagaggaaaatatagaactagtaaaagacagagcccatattgaa
aaagaaaacctagatgacgatgaagatttaaaagatgatgcagacgaagaagatgaaaaa
gatgaaccttcagaagaagttgaaataaaagttgatgacttatcaaatataaagggacta
aacgtagatgatcctgtgaagatgtacttaaaggaaattgggaaaatacctctattaact
gccgaagaagaagttgatttagcaaaaagaatggaagcaggagataactatgctaaaaaa
cggttagcagaaacaaacttaagattagttgtaagtattgcaaaaagatatgttggtcgt
ggtatgcagtttttagatctaattcaagaaggtaatttaggcttgatgaaagctgtagaa
aaatttgactataaaagaggatttaaattttcaacttatgctacatggtggatacgtcaa
gctataacaagagctatagctgatcaagctaggactataagaataccagttcatatggtt
gaaactattaataaattagtaagaattgaaagacagcttattcaagaacttggaagagat
ccaacaaatgaagaaattgccaaggaaatgggaatagaagttgaaaaggttagggaagta
agaaaaattgctcaagaacctgtatcgttagaaactcctattggagaagaagaagatagt
catttaggagattttatagaagatgaaactgctattgctcctgatgaagcagctaatttt
acaatgttaagggaacaattaaatgaaatattaggaacattaaatgatagagagagaaag
gttttagagttaaggtttggtttaactgatggaacacctagaactttagaagaagtaggt
aaggagtttaatgtaactagagaaagaatacgacaaattgaagcaaaagctttaagaaaa
ctgaaacatcctagtagaagtcaaaaacttaaagatttcttggagtaa
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