Miniphocaeibacter halophilus: JFY71_10020
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Entry
JFY71_10020 CDS
T08075
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mhap
Miniphocaeibacter halophilus
Pathway
mhap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JFY71_10020 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhap03019
]
JFY71_10020 (rny)
Messenger RNA biogenesis [BR:
mhap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JFY71_10020 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF7669
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QQK07615
LinkDB
All DBs
Position
complement(2016123..2017667)
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AA seq
514 aa
AA seq
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MNNVLITTIASIITLIIGLLVGFLMRKNISEKHIGSAEIHAAKIIEDANKEADSTKKAML
VEAKDEIFKLRTEQENENRERRLEIQKSEKRILQKEENLERKSDILEKKNAKLDTEMKNI
EIKQKEIQEIVDKQLQELERVANLTQDEAKNVLLNDLREQVTHEQAMIIKELEAKTKDKA
DSYAREIITTSIQRYAADYVAESTVSVVSLPNDEMKGRIIGREGRNIRAFETLTGVDLII
DDTPEAVVLSAFNPVRREIARIALEKLILDGRIHPTRIEEMVEKATKEVDATIKINGENA
CDETNVHGIHPEIVKLLGKLHYRTSYGQNVLKHSIEVSNIAGMMAAEIGADVKLAKRGGL
LHDIGKAIDHEIEGPHVELGVQAAKRFKEKPEVINCIESHHGDVEPTTIEAVLVQAADAI
SAARPGARREAIENYIQRLESLEEISSSFKGVDKSYAIQAGRELRIMVKPEEISEDEMII
LARDISARIEDELEYPGQIKVNVIRESRVTDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacgtattaattactacaatagctagtattattacccttataatcggcttgtta
gtcggttttttaatgagaaaaaatatttccgaaaagcatatcggaagtgctgaaattcat
gcagcaaaaataattgaagatgctaataaagaagctgattcaactaaaaaagctatgtta
gtagaagcaaaagatgaaatttttaaattaagaaccgagcaagaaaatgaaaatcgagaa
agaagattagaaattcaaaaatctgaaaaaagaattctacaaaaagaagaaaatcttgaa
cgtaaaagtgatattttagagaagaaaaatgctaaattagacactgaaatgaaaaatatt
gaaattaaacaaaaagaaattcaagaaattgtagataaacaacttcaagaattagaacga
gttgctaatttaactcaagatgaagctaaaaatgttttacttaatgacttaagagaacaa
gttactcatgaacaagctatgattattaaggagttagaagctaaaaccaaggacaaggca
gattcttatgccagagaaataatcaccacatctattcaaagatatgctgctgattatgta
gctgaatctaccgtatcggttgtttcattgcctaatgatgaaatgaaaggtagaattatt
ggtagagaaggaagaaatataagagcttttgaaacattaactggtgttgatttaattatc
gatgatacacctgaagctgtagttttatcagcctttaatcctgttagaagagaaatcgca
agaattgctcttgaaaaattaattttagatggaagaattcacccaactagaattgaagaa
atggtagaaaaagcaactaaagaagttgatgctactattaaaattaacggggaaaatgca
tgtgatgaaaccaatgtacatggaatccatcctgaaattgtaaaattattaggaaaatta
cattacagaacaagttacggtcaaaatgttttaaaacattctattgaagtatccaatatt
gcaggaatgatggctgctgaaataggagcagatgttaaactagctaaaagaggcggttta
ttacacgatattggtaaagcaatagatcatgaaattgaaggccctcatgttgaattaggt
gtccaagctgctaaaagatttaaagaaaaaccagaagttattaattgtattgaatcacat
catggcgatgttgaacctacaaccatagaagcggttttagtacaagctgctgatgcaatt
tcagctgcaagaccaggcgctagaagagaagctattgaaaattatattcaaagattagaa
agtctagaagaaatttcaagttcctttaaaggagtagacaaatcctatgctattcaagct
ggtagagaattaaggataatggttaaaccagaagaaatttctgaagatgaaatgattata
ttggctagggatatttctgctagaatcgaagatgaactagaatatccaggtcaaattaaa
gtaaatgttataagggaaagccgagtaacagattatgcaaaatag
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