Miniphocaeibacter halophilus: JFY71_10405
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Entry
JFY71_10405 CDS
T08075
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhap
Miniphocaeibacter halophilus
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhap03032
]
JFY71_10405 (topA)
03400 DNA repair and recombination proteins [BR:
mhap03400
]
JFY71_10405 (topA)
Enzymes [BR:
mhap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JFY71_10405 (topA)
DNA replication proteins [BR:
mhap03032
]
Prokaryotic type
DNA Topoisomerases
JFY71_10405 (topA)
DNA repair and recombination proteins [BR:
mhap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JFY71_10405 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DNA_ligase_ZBD
Zn_ribbon_RPB9
Zn_ribbon_InsA
Toprim_4
DZR
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QQK07686
UniProt:
A0A7T6VPH5
LinkDB
All DBs
Position
complement(2090719..2092779)
Genome browser
AA seq
686 aa
AA seq
DB search
MAKNLVIVESPTKAKTIGKMLGSNYKVVASVGHLRDLPKSKMGIDIENNFEPQYINVRGK
GDIIKELKKQAKKSEKVFLATDPDREGEAISWHLSNLLGLDPNEKNRVEFNEITKSTVKE
AVKNPRKIDMNLVNAQQARRVLDRLVGYEISPVLWKKVKSGLSAGRVQSVALRLLCEREK
EIREFVPKEYWSIEATHLKDKINFESSFYGELVKGKEEKKELKNINEAEEIISNLDLNNF
MVSNIKKTKKKRNPYPPYTTSTLQQDANRKLGFSASKTMSVAQQLYEGISIGNEGTVGLI
SYMRTDSTRISKDIINEALEYIKNKYGSQYASKGNSYGKNKKGAQDAHEAIRPSSIIRTP
DSLKDYLSNDQYKLYRLIWNRVVASQMTQSQYESTNITLLNNNFVFKANGNIELFKGFTI
IYSVEDKNVLLPTVEENEIINTSKIDKTQHFTKPKARFTEASLVKTLEEDGIGRPSTYAS
IISSLLKRNYVKLDKKKFFTTELGENVNAFLLKYFSDIINQKFTAEMEDELDKIEEYDLD
WKNTISKFYDSLEENLAKAKSDTNTYKVEDKKIDEFCPECGSQLVIKHGRNGEFIGCSGF
PNCKYTKAIIKGTGVKCPKCGGEIIEKVSKRGKLFYGCSNYPNCDFAVWDKPIDEKCPKC
NSILVHKKNRKVDEIKCSNEKCDYVK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagaatttagttattgtagagtctccaacaaaagcaaagactattggaaaaatg
cttggaagtaattataaagtcgtagcttctgttggacatttaagagatcttcctaagagt
aaaatgggaatcgatatagaaaacaactttgaacctcaatatattaatgttaggggcaaa
ggtgacataataaaagaattaaaaaaacaagcaaaaaaatctgaaaaagtatttcttgca
acagacccggatagagaaggtgaagcaatttcttggcatcttagtaatttattaggatta
gatcctaatgaaaaaaatcgagttgaatttaatgaaattactaaatcaacagttaaagaa
gctgtaaaaaatcctagaaaaatagatatgaatctagtaaatgctcaacaagctagaagg
gtattagatagacttgtaggttatgaaatatctcctgttctctggaaaaaggtcaaaagt
ggacttagtgccggtagagtacaatcagtagccttgcgtttactatgtgaaagagaaaag
gaaattagggaatttgttccaaaagaatactggtcaattgaagccactcatcttaaggat
aaaattaattttgaatcatctttttatggagagttagttaaaggtaaagaagaaaaaaaa
gaattaaaaaatattaatgaggcagaagaaattattagtaacttagatttaaataatttc
atggtttcaaacattaaaaaaactaaaaagaaaagaaacccttatcctccatatacaaca
agtacgttacaacaagatgcaaatagaaaattaggtttttctgcatccaaaaccatgtct
gtagcacaacagctttatgaaggtattagtataggaaatgaaggtactgttggtttaatt
tcctatatgagaacggattctacaagaatttctaaagatataattaatgaagccttagaa
tatattaaaaacaaatatggcagtcagtatgcttcaaaaggtaatagttatgggaaaaat
aaaaaaggggctcaagatgcacatgaagctataagaccaagttctataatacgaactcct
gattcgttaaaggattatttaagcaatgatcagtataaattatacagacttatttggaat
agagtagtagctagccaaatgacacaatcccaatatgaatcaactaatattaccctttta
aataacaattttgtctttaaagctaatggaaacattgaattatttaaaggctttactata
atttattctgttgaggataagaatgtactattgcctacagttgaagaaaatgaaataatt
aacacaagtaaaattgataaaactcaacattttactaagccaaaagcaaggtttactgaa
gcttccttggtaaaaacattagaagaagatggtataggacgacctagtacttacgcttca
attataagcagtcttttaaaaagaaactatgtaaaattagataaaaagaaatttttcact
actgaactaggtgaaaatgttaatgctttcttattaaagtattttagcgatataataaat
caaaaatttacagctgaaatggaagatgaattagataaaattgaagaatatgatttagat
tggaaaaatactatttcaaaattctatgatagtttagaagaaaatttagcaaaagccaaa
tcagatacgaatacctataaggttgaagataaaaaaattgatgagttttgtccagaatgt
ggttcacaattagtcataaaacatggacgtaatggagaatttataggttgttcaggattt
cctaattgtaaatatacaaaagccataattaaaggtacaggggttaaatgtcctaaatgt
ggtggagagattattgaaaaagtttcaaaaagaggaaagcttttttatggttgtagcaat
tatccaaattgtgactttgctgtttgggataaaccaatagatgagaaatgtcctaaatgt
aattcaattttagttcataagaaaaatagaaaagtagatgaaattaaatgttctaatgaa
aaatgtgattatgtaaaataa
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