Miniphocaeibacter halophilus: JFY71_10905
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Entry
JFY71_10905 CDS
T08075
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhap
Miniphocaeibacter halophilus
Pathway
mhap03420
Nucleotide excision repair
mhap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JFY71_10905
03430 Mismatch repair
JFY71_10905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhap03400
]
JFY71_10905
Enzymes [BR:
mhap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JFY71_10905
DNA repair and recombination proteins [BR:
mhap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JFY71_10905
MMR (mismatch excision repair)
Other MMR factors
JFY71_10905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQK07776
UniProt:
A0A7T6VPP4
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All DBs
Position
2179650..2181449
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AA seq
599 aa
AA seq
DB search
MIISDQQKKAISHKNGPALVLAVPGSGKTTVLLNRIIYLNNTQSVEYKQILNLTFSKTQA
TDMKTRFDSMTSNNKAVFSTIHAFAFNVIKLFSKKYKINLKLIEGNNIFNKYKLLKRIFY
ENYKSPPSNDDLDYFFANYSLMKNNMLNIDNFNSNHFINIAIKYEDYKKKNNLFDFDDML
TYAYNILKNNDDILRIIKRNYKYFQLDEGQDASLIQFKILELIAYPENNIYILADDDQSI
YSFRGANPEYLLKINSIFKDIKYYYLNKNYRSTKDIVMLSDYIIKNNKERYLKTVESHND
EKTPIQIIKVKNIETQNIFISNKIFKLNNKENLAILFRNNISAYAIAFDLIKNKIQFNKR
LNFNNNSLNIVLQDLNNIIDFALDNSNLELFKSIYYKLNLYLKKDYIYGLNIGFNKSILD
TILDDSYIKEYQKELVENLKFVLDKVVNLNLYNSIKLIFEELGYIEYISKHFENIPIKYI
QEIILYFAKDYNTINELLKAFKNIESTLKNKNFNTSNIFISTIHQSKGLEYDNVLLIDLV
DGEFPIYSDKASNLEEERRLFYVGITRAKKQLYLVFPKYRYNTKVKPSKFFNEIKKINK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgattatatcagaccaacaaaaaaaagcaatttcacacaaaaatggtccggcattggtt
ttagctgtgcccggctcaggtaaaactacggttttgttaaatagaatcatatacttaaat
aatacccaatctgtagaatataaacaaattttaaatttaacctttagtaaaacccaagct
acagatatgaaaactcgtttcgattcaatgaccagtaataacaaggcagttttttctaca
atccacgcttttgcttttaatgttattaaattattttctaaaaagtataaaataaattta
aaattaatagaaggaaataacatttttaataaatataaattattaaaaagaattttttat
gagaattataaatctcccccttctaatgatgatctagattatttttttgcaaactatagt
ctaatgaaaaataatatgctaaacatagataattttaatagcaatcattttattaatatt
gcaataaagtatgaggattataaaaagaaaaataacttatttgattttgatgatatgcta
acttatgcatataatatattaaaaaataacgacgatattctaaggattataaaaagaaat
tataaatattttcagttagatgaaggtcaagacgctagtctaattcagtttaaaatttta
gaattaatcgcttatccagaaaacaatatatatatactagccgatgatgatcaatctatt
tactcttttagaggtgctaatccagaatatttgttgaaaattaattcgatttttaaagat
ataaaatactattatttaaataaaaattataggtctacaaaggatattgtcatgctttct
gactatataataaaaaataataaggaaagatatttaaaaacagttgaaagtcataatgac
gaaaaaactcctatacaaataataaaagttaaaaatattgaaacacaaaatatatttatt
tccaataaaatttttaaactaaataataaggaaaatttagctattctttttagaaataat
ataagtgcttacgctattgcctttgatttaataaaaaacaagatacagtttaacaaaaga
ttaaatttcaataacaatagcctaaatattgttctacaggatttaaataatattatagat
tttgctcttgataatagtaatcttgaactttttaaatcaatttattataaattaaattta
tatttaaaaaaggattatatatatggcttaaatattggttttaacaagagtatattagat
acaatattagacgattcctatataaaagaatatcagaaggaattggtggaaaatttgaaa
ttcgtacttgataaagtagttaatttgaatttatacaattctattaaattgatttttgaa
gagttgggctatatcgaatatatttctaagcactttgaaaatattccaataaaatatatt
caagaaataattttatactttgccaaggattataatactataaatgaacttttaaaagct
tttaaaaatatagaatccacattgaaaaataaaaactttaacactagcaatatttttata
tcaactatacatcagtcaaaaggattggaatatgacaatgttttattaattgacctagta
gatggtgaatttccaatatacagtgacaaggcttctaatttagaagaggaaagaagatta
ttctatgttggaattacaagagcaaaaaaacaattatacctagtattccctaaatatagg
tacaatacaaaggttaaaccgtctaaattctttaatgaaatcaaaaaaattaacaaatag
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