Mannheimia haemolytica 89010807N: WC39_09515
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Entry
WC39_09515 CDS
T03749
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mhaq
Mannheimia haemolytica 89010807N
Pathway
mhaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WC39_09515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhaq03400
]
WC39_09515
Enzymes [BR:
mhaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WC39_09515
DNA repair and recombination proteins [BR:
mhaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WC39_09515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_12
AAA_30
DEAD
AAA_25
AAA_11
NEPRO_N
Motif
Other DBs
NCBI-ProteinID:
AKA11886
UniProt:
A0A547EMK7
LinkDB
All DBs
Position
complement(1863561..1867085)
Genome browser
AA seq
1174 aa
AA seq
DB search
MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNPLTVEQILVVTFTKAAT
EELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQIYPLIPNIHEALLRLSIA
EREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQSDLLKKLSEEVWREQFYPQDL
AITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQDIAEHLAQYQQFINEVKSYWKTH
SDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMNQWANSQHNHFPAGLYLFTTEKIAA
GTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSAMLQYQFLIALKAKLAEYKQSHPQRSF
DDLLTMLNQALKNLHTGEALSQKIRAMYPFAMIDEFQDTDLTQYEIFSQIFMAENAENGF
IMIGDPKQSIYKFRGADIFTYLRAAKQADEQFTLGKNWRSLPEVVQAVNNLFSFANDNSP
FLYEDIGFHPVEADSQKGQLVSEQGHFVGYITENSKLDDLAEMCAYQIHQQLEAMAQGKF
GVEKNGEFQSFAAKDIAILVRKGSQAKRIKKALAKRNIKSVYLAESASVFGSEIATELCW
LLQAALNPYHYKALLSALGSTLWGLTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVL
PMLHKIYLEQGIIERLKGLENADRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSP
DFNDEQQLRLESEEELIKIVTIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGAL
DWCLGSEEASFSLQYEAYAEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIP
TGKVPVSDYFSQKRIAANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTS
LYAQHERFSEGKSERVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFF
EHCQFNEQIDREAVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLN
EWQFYLRLKNDKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLI
DYKSNFLGYLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGV
AYLFLRAMNGENDNGVYFDKPTKQLIEEMDRLFG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctaaatcctatccaactacctttgaataaatccgttttaatcgaagcgtcg
gcaggtacagggaaaacctttaccattgccaacctgtatttgcgtttattgctcggcatt
ggttgcaacccgttaacggtggaacaaattttggtggtgacatttaccaaagcagcaacc
gaagagttgaaaaaccgtatccgtaaaaatattcagcaatgtgccgactttttaaaagat
caagctgatggtttggaagtggaaagtacaaaatcctatcgaaacaaccttgattttttg
gcacagatttatccgctcattccgaatattcacgaagcattgttacgtttaagtattgcc
gaacgggaaattgataccgccagcgtgtttaccattcacggcttttgtcaaaaaatgctg
gttcagtttgcgtttgagtcgggcgtgcggtttgacttggatttacagccaaaccaaagt
gatctacttaaaaaattaagtgaagaagtctggcgagagcaattctatccgcaagattta
gccatcacttatgcggttgccgaacaacttggtacgccggaatatgccctcaatgcggta
aggcgttatttatctactgaattacctgaaccaaatgcctctttaaatcaagatattgcc
gagcatttggctcaatatcagcagtttattaatgaggtgaaatcctattggaaaacgcat
tcagatgaactggttgaaactatccgccacgatttaaagcataaaattacgctgcacgga
ggttggtatcgagcgaccacttttgaagccggtgtggaagtgatgaaccagtgggctaat
tcgcaacataaccatttcccggcagggctttatttattcactacagagaaaattgcggct
ggcacgaaaaagagctgtgagccgatagattcccctcatcttgcaaaaaatcaggctttt
ttgaccgcttacaaggaacgttttgaaaacagcttgtcagcaatgttgcagtatcaattt
ttaattgctctcaaagcaaaattggcagagtacaaacaatcgcacccacaacgcagtttt
gatgatttactcacaatgctaaaccaagcgttgaaaaatctacacacgggcgaagccttg
tctcagaaaattcgggcgatgtatccttttgcgatgatcgatgagttccaagataccgat
ttaacccaatatgaaattttcagccaaatttttatggcagagaatgcagagaacggcttt
attatgattggcgacccgaaacagtcgatctataaattccgtggggcggatattttcacg
tatttgcgagcagcaaagcaggctgatgaacaattcacattgggcaaaaactggcgttcg
ttgcctgaagtggtgcaagcggtcaataatttgttttcttttgcaaatgataactctccg
tttctttatgaggatattggctttcacccagtggaggctgatagccaaaaaggtcagtta
gttagtgagcaagggcattttgtaggctacatcacggaaaacagtaaattagatgatttg
gctgaaatgtgtgcttatcaaattcatcaacagcttgaggcgatggctcaaggcaaattc
ggagttgaaaaaaacggcgaatttcaatcctttgctgcaaaagatattgcgattttagtc
cgaaaaggttcacaagctaagcgaatcaaaaaggcgttggcaaaacgtaatatcaaatcc
gtctatttagctgaatcagcttctgtatttggttcggaaattgcaacagaattgtgttgg
ttattgcaagccgcactgaatccgtatcattacaaggcattattatcggcgttaggctca
accttgtggggcttaacggcggcagagatccaccgctataaggaaaatgagcaactttgg
gatctgaaagtcaatcagtttgtggaatacagcaacatttggaaagagcagggcgttctg
ccgatgttgcataaaatctacttggagcagggcattatcgaacgtttgaaaggtttggaa
aatgcggatcgcttgattacggatttattgcatttaaccgaaattttgcaggaaacctcg
caagcgttagagtctgaagctgaactgttgcggtggtatgaaaagcaagttaattcgccc
gattttaatgacgagcaacaacttcggttggaaagtgaagaggagctaatcaaaattgtg
acgattcacggctcgaaaggcttgcaatatccaattgtttggttaccttttgtttcacaa
aaaagtgagggagacacgcagacagcattaagtttatatcgcaattctcaaggtgcgctg
gattggtgtttaggctcagaagaggcaagtttttcgctacagtatgaggcttatgcggaa
gatttacgtttgctgtatgtggcattaacccgcgcggaatctcagcttaacttagtgttg
ccgaaagagatttccggctggtctccactccattacttgttagcagacggggaaatacct
acaggaaaagtgcctgtttcagattattttagccaaaaacggattgctgctaatttggtt
gaagtagccggggaattacctttctcactgtgggaaggagaacaatcttcagacgattac
caagcaaaaacctttagtggcaatatccgtgtggttggtcaaattaccagctttacttca
ctttatgcccaacacgagcgttttagtgaagggaaatcagaaagggtaatggatttagcc
caagatcgagatgtacatatagaaaccattgaggcaggttattcaagtgaaactgccgct
ttctcgccattccaattcccacacggtattaaagtgggcacggtgttacatcactttttt
gagcattgccaatttaacgaacaaattgatagagaggctgttgctaaagtatgcgagcaa
ttagggctaagcgaggaatggattgaaccaacagcattatggtttgagcgtattctaact
acccctttggcagaggcaaatttctgcttaaaagcgattgatgaaaccaaacgattaaac
gagtggcaattctatttacgcttaaaaaatgataaagccttacatcaattaaatgcgtta
ttaaagcaacatagccctttagcaaaaactttacctgaattgcaattaccgcaattagaa
ggttttgtgcgaggctttgtagattgtatcgtgcaagtggaggagaaattctacttaatt
gattacaaatcgaatttcttaggctatctgccacaaaattatgcgaaagaacacattcaa
cgggaaatgggcagacaacgctatgatttgcaatatctgctttacactctcgccttacac
cgttatctaactgcccgtttaggtgaaaaatacgattatgaacgagacttcggcggagtg
gcttacttgttcttaagggcaatgaacggcgaaaatgataacggcgtttattttgacaag
ccgactaagcagttgattgaagaaatggatcggttgtttgggtaa
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