Entry |
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Name |
(GenBank) DEAD/DEAH box helicase
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KO |
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Organism |
mhar Mariluticola halotolerans
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mhar00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1P08_01170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mhar03019]
L1P08_01170
03009 Ribosome biogenesis [BR:mhar03009]
L1P08_01170
Enzymes [BR:mhar01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L1P08_01170
Messenger RNA biogenesis [BR:mhar03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1P08_01170
Ribosome biogenesis [BR:mhar03009]
Prokaryotic type
rRNA helicases
L1P08_01170
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
236735..238507
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AA seq |
590 aa
MTEFEGVVPALSQALTNRGYTDLTPVQKAMLAPELRDADALVSAQTGSGKTVAFGMAMAP
TLLDADDRFTRPDSPLALVIAPTRELALQVKKELEWLYALTGAFVASCVGGMDMRTERRA
LERGAHIVVGTPGRLRDHITRRSLDMSGLRAVVLDEADEMLDLGFREDLEFILESAPEER
RTLLFSATVPKSIANLAKSYQRNAVRVATGSEQKQHLDIEYKALPVPTADRENAIINVLR
FYEAQNALVFCATRATVNHMTARFNNRGFSVVALSGELSQSERTHALQAMRDGRARVCIA
TDVAARGIDLPGLELVVHADLPTNPETLLHRSGRTGRAGRKGVSVLIVPQNGRKRAERLL
GAAKITAVWDKPPSIDDVLKRDDERLLSDPDLNTPIADEERAFLAELLEKHGPEQIAAAF
VRRYRAGRSAPEELMDVPAGPDRGAPRGEKKERREGFEKSVWYSISVGRKQNAEPRWLLP
MLCGAGQLSKRDIGAIKMQQDETFVELDARCDDRFKAAIGPNKTLEKNITVKALDGVPSF
SNDGGGSRQPYAGKKTGGKPNFEKAGFKGRKSGAATAMKKKKPKKKPRPE |
NT seq |
1773 nt +upstreamnt +downstreamnt
atgacagagtttgaaggcgtcgtgccggcacttagccaggcgttgaccaatcgcggttac
actgacctgaccccggtacaaaaggccatgctggcccccgagttgcgcgatgcggatgcg
ctggtttccgcgcagaccggctcgggcaagaccgtggcattcggcatggcgatggccccg
acgctgctggatgcggatgaccgcttcacccgtccggattcgcctttggcgctggtgatc
gcgccgacgcgcgaactagccttgcaggtgaaaaaagagcttgagtggctttatgcgctg
accggtgcctttgtggcctcgtgtgttggcggcatggacatgcgcaccgagcggcgggcg
ctggagcgtggcgcgcatattgttgtgggcacgccgggccgtttgcgtgaccatatcacg
cgccggtcgctggatatgtctggcttgcgcgctgtggtgctggatgaagctgacgaaatg
cttgatctgggctttcgggaagatctggaattcattctggaatctgcgcctgaagagcgg
cggacgctgttgttttccgctaccgtgccgaagtcgattgccaatctggcgaaaagctat
cagcgcaatgctgtgcgggtggcgaccggatctgaacaaaagcagcatctggatattgaa
tacaaggcactgccggtgccgacggctgaccgcgagaacgccattatcaacgtattgcgc
ttttatgaagcgcagaatgcgctggttttttgtgcgacacgggcaaccgtcaatcacatg
acggcgcggttcaacaatcgcggcttttctgttgtggcgctgtcgggcgaattgagccag
agcgagcgcacccatgcgctgcaagccatgcgcgacgggcgggcacgggtgtgtatcgcc
accgatgttgcggcacgcggcattgacttgccggggctggaactggtggtgcatgccgat
ttgccgaccaatccggaaaccctgttgcaccgcagtggccgcacgggccgggccgggcgc
aagggcgtgagtgttttgattgtgccgcagaacgggcgcaagcgggccgagcgcctgttg
ggtgcggccaagattaccgctgtttgggacaagccgccctcgattgatgacgtgctgaag
cgggatgacgagcgcttgctctccgacccggatctcaacacgccgattgcggatgaggaa
cgggcgtttctggctgaattgctggaaaagcacgggccggagcagattgcggcggccttt
gtgcggcgctatcgcgcgggacgttcggcacctgaagaactgatggatgtgcccgctggc
cccgacaggggtgcgccgcgtggcgagaagaaagagcgccgcgagggctttgagaaaagc
gtttggtattcgatctcggtggggcgcaagcagaatgcggagccgcgctggctgctgccg
atgctgtgtggcgcggggcaattgtccaagcgtgacattggcgcgatcaagatgcagcag
gacgagacctttgtggaactcgatgcgcgctgtgatgaccggttcaaggccgcgattggc
cccaacaagacgctggaaaagaatatcacggtgaaggcgctggatggcgtgccgagcttt
tccaatgatggtggcggcagccgccagccctatgcgggcaaaaagaccggcggcaagccg
aactttgaaaaggcgggtttcaagggccgtaaatccggcgctgcgaccgcaatgaaaaag
aaaaagccgaagaaaaagccgcgtccagagtag |