Mariluticola halotolerans: L1P08_02890
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Entry
L1P08_02890 CDS
T09219
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhar
Mariluticola halotolerans
Pathway
mhar03030
DNA replication
mhar03430
Mismatch repair
mhar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L1P08_02890 (dnaE)
03430 Mismatch repair
L1P08_02890 (dnaE)
03440 Homologous recombination
L1P08_02890 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhar03032
]
L1P08_02890 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhar03400
]
L1P08_02890 (dnaE)
Enzymes [BR:
mhar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L1P08_02890 (dnaE)
DNA replication proteins [BR:
mhar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L1P08_02890 (dnaE)
DNA repair and recombination proteins [BR:
mhar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L1P08_02890 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UJQ94951
LinkDB
All DBs
Position
609258..612704
Genome browser
AA seq
1148 aa
AA seq
DB search
MTQPGFIHLHAHSAFSLLEGALPLGKLLALAENDAQPAVGVADTSNLFGALELSEKAAGK
GIQPLIGCELVVDLGSQSEERGNDRSFGKDTIVLMAMSGEGYSNLSRLVSRAYMEGDDGR
ALARVDWMENGATDGLICLSGGPEGAIDPWFLNGLEAQAHARLEHLRRIFGDRFYIELQR
HGRHNEAVVEPQLIDYGYRYGVPLVATNEPFFPRQSDYEAHDALLAIAGGTVLAQTERRK
LSDQHYFKTRAEMQEVFADLPEALENTIEIAQRISYRPRTRGPILPKFAAAPDLSEEDAD
HAEGEELARQAREGLAARIAAHGIAEAFTEDAYRERLEFELEVIRSMKFPGYFLIVADFI
KWAKAHEIPVGPGRGSGAGSLVAYALTITDLDPLRYNLLFERFLNPDRVSMPDFDIDFCQ
DRREEVIAYVQEKYGREQVAQIITFGTLQARAALRDVGRVLQMPYGQVDRICKLVPANPA
APVTIAEAVAGEPKLQAMRDEDETVAELLTISQNLEGLFRHASTHAAGIVIGDRPLQDLV
PLYRDPRSDMPVTQYNLKWVEPAGLVKFDFLGLKTLTVIDNAVRMINGGTGDFNISNIPI
DDEETYKLYQRADTVGVFQVESPGMRRALIDLKPDRFEDIIALVALYRPGPMDNIASFCN
RKHGKEDASTLHKDMDAILSETYGIIIYQEQVMQIAQTLSGYSLGEADLLRRAMGKKIKA
EMDAQRTRFVEGALKKDISEKRADQIFELLAKFANYGFNKSHAAAYALVSYQTAYLKAHY
PREFLAASMTLDLGNTDKLYDFKREAARMDIEIVPPCVNRSQVPFSVQDGRIHYSLCAVK
GVGKHVAEHIVAIRGDAPFVDLADFAVRVDPKIVNKRTLETLINAGAFDTLVPQREQAFA
VADAIIGTAQRMTNERSEGQWNLLDTDAPEPISLPTGVAVWSAAEKLDREFSAIGFHLSG
HPLDEFAELFEKLRVQRWSDFERAVRDGARAGRLAATVSSRQDRKTRKGTPMAIMGLSDP
SGSFECIAFSEAINQYGEYLETGKSAIIEVEADQRPDGVSLRLLRAQPIEMAAEKLGRHL
TVFAGDAKCLEPIKAQLKRGGEGAVSLVIIRDGGAREYEVSLPGNFRLTPELAGGIKSLD
GVVDVSLS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccggatttattcacctgcacgcccattctgccttttccttgctggagggg
gctttgccactcggcaagctgttggcgctggcagaaaatgacgcccagccggcggttggt
gtggcggacacatccaatttgttcggcgcgcttgaactttcagagaaagccgcgggtaaa
ggcattcagcccctgattggttgcgagctggttgttgatctgggcagccagagcgaagag
cgtggcaatgaccgcagctttggcaaagacaccattgtgctgatggcgatgagcggggag
gggtattccaatctctcacgcctcgtcagccgcgcctatatggaaggcgatgacgggcgc
gcactggcgcgggtcgactggatggagaatggcgcgacggacgggctgatctgtctcagc
ggtggtccggaaggggcgattgatccctggttcctcaatggtctcgaggcgcaggctcac
gcgcggctcgagcatttgcggcggattttcggtgaccgtttctatatcgaattgcagcgg
catggccggcataacgaggcggtggttgagccgcaactgatcgattatggctatcgttat
ggtgtgccgcttgtcgccaccaatgagcctttctttcccaggcagagcgattacgaggcg
catgacgccttgctggcgattgccggtggcactgttctggcccagaccgaacggcgcaag
ctcagcgaccagcattatttcaagacgcgcgccgaaatgcaggaagtgtttgccgacctg
cccgaggctttggaaaacacaatcgagatcgcccagcgcatcagttaccggccgcgcacc
cgggggccgattctgcccaaatttgccgcagcgcctgatctgagcgaggaagatgcggat
cacgccgagggcgaagagctggcccggcaggcccgcgaaggtctggccgcacgcattgca
gcacatggcatagccgaggcgttcaccgaagacgcctatcgagaacggcttgagttcgag
cttgaagtgatccggagcatgaagtttccgggctatttcctgatcgttgccgactttatc
aaatgggccaaggcccatgaaattccggtggggccgggtcgtggttcgggtgctggctcg
ctggttgcctatgcgctgaccattaccgatctggatccgctgcgctacaatctgctgttc
gaacgcttcctcaatcccgaccgtgtgtcgatgccggatttcgatatcgatttctgtcag
gaccggcgtgaagaagtcattgcctacgttcaggagaaatatggccgcgagcaggtggcc
cagatcatcaccttcggaacgttgcaggcccgtgcggcgctgcgtgatgttgggcgtgtg
ctgcaaatgccctacggccaggtggaccgtatctgcaagctggtccccgccaacccggcg
gccccggtcacgattgccgaagccgtcgccggtgaacccaagcttcaggccatgcgcgat
gaggatgaaaccgtcgccgaattgctgacgatcagccagaatctggaaggcctgttccgc
cacgcctcaacccatgcggccggtatcgttattggtgacaggcccctgcaggatctggtg
ccgctttatcgcgatccgcgctcggatatgccggttacccagtacaatctgaaatgggtg
gagccggccggtctggtgaaattcgatttcctcgggctgaaaaccctgacggtgatcgac
aatgccgtgcgcatgatcaatggcggcactggtgacttcaatatctccaacatccccatt
gatgatgaggagacctacaagctctaccagcgggccgatacggttggcgtgttccaggtg
gaaagtccgggcatgcgtcgggcgctgatcgacctcaagcccgaccggtttgaggacatc
atcgcgcttgtggcgctctatcgtccggggccaatggacaatattgccagcttctgtaac
cgcaagcacggcaaggaagatgcgtccaccctgcacaaggacatggatgccatcctgtcc
gagacctatggcatcatcatctatcaggaacaggtgatgcagatcgcccagacgctgtcg
ggctattcccttggtgaagccgaccttttgcgtcgcgccatgggcaagaagatcaaggcg
gagatggatgcccagcgcacccgttttgtcgaaggggcgctgaagaaggatatttccgag
aagcgcgccgaccagatttttgagctattggccaaatttgccaattacggtttcaacaaa
tcccacgctgccgcctatgcgctggtgtcctatcagacagcctatctcaaggctcattac
ccacgtgaattcctcgcggcgtcaatgacgcttgatcttggcaataccgacaagctttac
gatttcaagcgcgaagcggcgcggatggatattgaaatcgtgccgccatgcgtcaatcgt
tcgcaagtgccgttctcggtgcaggatggccggatccattacagcctttgtgctgtaaag
ggtgtgggcaagcatgtcgccgagcatatcgttgcaattcggggcgatgcgccttttgtt
gaccttgccgactttgccgtgcgggtcgatcccaagatcgtcaacaagcggacgcttgaa
acactgatcaatgccggggcctttgacacgctggtgccccagcgcgaacaggcctttgcg
gtggcggacgccattatcggcactgcgcagcgcatgaccaatgagcggtccgaggggcag
tggaacctgcttgataccgacgcgccggaaccgatttccctgccaacgggtgtggccgtg
tggagcgcggcggaaaagctggaccgcgagttctcggcgatcggctttcacctgtccggc
catccgctcgacgaatttgccgaactgtttgaaaaactccgcgtgcagcgctggtctgat
ttcgagcgggccgtgcgcgatggcgcgcgggccggccgcttggcggccaccgtttcctca
cgtcaggaccgcaaaacccgcaagggcacgccgatggcgatcatgggcctgtccgatccc
agcggcagttttgaatgcatcgccttttccgaagccatcaaccaatatggcgaatatctg
gaaacgggcaaatccgcgatcatcgaagtggaagcggatcagcggccggatggcgtgagc
ctgcgtttgctgcgggcccagcccatcgaaatggcagcggaaaagctggggcggcatctg
acggtttttgccggggacgcgaaatgtcttgaacccatcaaggcccagctgaaacggggc
ggtgagggggctgtgagtctcgttattatccgggacggcggtgcccgtgaatacgaggtt
tccctgcctggcaacttccgtctgacacccgaactggcgggtggcatcaaatcgctggat
ggcgttgttgatgtcagtctgagttga
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