Mariluticola halotolerans: L1P08_04130
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Entry
L1P08_04130 CDS
T09219
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhar
Mariluticola halotolerans
Pathway
mhar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1P08_04130 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhar03019
]
L1P08_04130 (recQ)
03400 DNA repair and recombination proteins [BR:
mhar03400
]
L1P08_04130 (recQ)
Enzymes [BR:
mhar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1P08_04130 (recQ)
Messenger RNA biogenesis [BR:
mhar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1P08_04130 (recQ)
DNA repair and recombination proteins [BR:
mhar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1P08_04130 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UJQ95180
LinkDB
All DBs
Position
complement(873459..875237)
Genome browser
AA seq
592 aa
AA seq
DB search
MQQTHALLKSVFGYDSFRAGQQDIVEAILGGNDVLAIMPTGGGKSLCYQLPALRREGVTL
VISPLIALMRDQVAYLKQNGIAAGALNSNSSEEERDEIFAALRENRLKLLYMAPERLSSA
NAILAHANITMLAIDEAHCVSQWGHDFRPDYLRIGELREALGNPQIAAFTATADTETRKE
IIAKLFAAPPREFLHGFDRPNLFLAFGPKSGSRSQIADFAAKHAGQSGIVYCASRRKVED
LAAYLVAKGFNALPYHAGLPTETRQENQDRFSNEDGVIMTATVAFGMGVDKPDVRFVAHA
DLPATVESYYQEIGRAGRDGLPASTLTLYGVDDIKLRRRQIDEGDAPVERKRADHLRLNA
LLAIAEAPVCRRQTLLAYFNEASPPCGNCDLCKSPPEMIEGTVPAQKALSAVARTGERFG
LEHLIAILCGDATERVVELGHDQLPTFGIGTEFDKGQWRGVFRQIYAAGLAAVDPAFGGW
RMTEEGWELLRGKRDFHIRRDTLKVARARRGSSAPAELDEADAPLLTALKAKRRELAAEA
GVPAYVIFADRTLIDMAAKRPRDSHAMTEIHGVGERKLERFGAAFLAVIAEA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaactcacgcgcttcttaaatccgtatttggctatgatagtttccgggcggga
cagcaggacattgttgaggccattttgggtggcaatgacgtgctggccatcatgccaacc
gggggcggcaaatcgctgtgctatcaattgcccgcgctgcgccgggaaggggtgacgctg
gtcatctcgccgctgattgcgctgatgcgcgatcaggtggcctatctcaagcaaaacggc
attgccgccggagccttgaactcgaactcttcggaagaagagcgcgacgagatttttgcc
gccctgcgggagaaccggctaaagttgctgtatatggcaccggaacgcttaagcagcgcc
aatgccattctcgcccatgccaatatcaccatgctggccatcgatgaggcccattgtgtc
agccagtggggtcatgatttccgccccgactacctgcgcattggcgaattgcgcgaagcg
ctgggcaatccccaaattgcggcttttacggcgactgccgacacggaaacccgcaaggag
atcattgccaaactgttcgccgcgccgccgcgcgaatttctgcatggctttgaccggccc
aacctgtttctggcgttcggccccaaaagtggttcgcgcagccagatcgccgattttgcc
gccaaacatgccgggcaatcgggcattgtttattgtgcctcgcgccgcaaggttgaggac
ctcgccgcgtatctggtcgcgaagggctttaacgccttgccctatcatgctggattgcca
acagaaacgcgtcaggaaaatcaggaccggttctcgaacgaggacggcgtgatcatgacg
gcaacagttgcctttggcatgggggtggacaagccggatgtacgctttgtcgcccatgcc
gacctgccagcgaccgttgaaagctattatcaggagatcggccgtgccgggcgcgacggg
ctgcccgcgagcacgctgacgctttatggcgtggatgacatcaagctgcgccgtcgccag
atcgatgaaggcgatgcgccggtcgagcgcaagcgcgccgaccatttgcggctcaatgcc
ctgctggctattgccgaagcccctgtgtgccgccggcagacgcttctggcctatttcaac
gaagccagcccgccttgcggcaattgcgatttgtgcaaatctccgccggaaatgattgag
ggcacggtgccggcgcaaaaggcgctttcggcagtcgcgcggaccggtgagcggttcggg
ctggaacacctgattgccattctgtgtggcgatgcgaccgaacgggtggttgaactgggt
cacgaccaattgccgacatttggtatcggcaccgaatttgacaaggggcaatggcgcggc
gtcttccgccagatctatgccgccgggcttgccgctgttgatccggcctttggaggctgg
cggatgacggaagagggctgggaattgctgcgcggcaagcgcgatttccatatccggcgc
gataccctgaaagtggcccgcgcgcggcgcggcagcagtgcgccggcagaactggacgag
gcggatgcgccattgctgacagcgttgaaggccaagcgccgcgagctggccgccgaagcg
ggcgtgcctgcctatgtaattttcgccgaccgcaccctgatcgacatggccgccaagcgc
ccgcgcgacagccatgccatgaccgaaatacacggtgtgggcgaacgcaagctggaacgg
ttcggcgcggcatttctggcggtgatcgccgaggcatga
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