Mariluticola halotolerans: L1P08_04220
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Entry
L1P08_04220 CDS
T09219
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mhar
Mariluticola halotolerans
Brite
KEGG Orthology (KO) [BR:
mhar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhar03016
]
L1P08_04220 (rnd)
Enzymes [BR:
mhar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L1P08_04220 (rnd)
Transfer RNA biogenesis [BR:
mhar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L1P08_04220 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Coat_X
Motif
Other DBs
NCBI-ProteinID:
UJQ95198
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All DBs
Position
898765..899922
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AA seq
385 aa
AA seq
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MHVITATAELAKFCQHAAQFDFVTVDTEFLRETTYWPKLCLVQAATTEQAVLIDPLAKGI
DLSPLFELMANAAVTKVFHAARQDVEIFVKLSGDVPVNLFDTQIAASVCGYGDSVSYDNL
VRSVVGVQIDKSSRFTDWSARPLSEKQLTYALADVTHLRDIYVTLRAKIDEMDRASWVAD
ENATLSSIDTYIVKPEDAWRRLKMKINRPRDLAALKALAAWREQRAQDNDQPRGRILKDD
AIYELAVQRPLQAEKFDKMRVVPRGFGRSAAASEIIKVLKEVEDLPKDSLPTLPARVHGP
SPKGPIGDLIRVLLKAVSEREGVAARIIATSDDIDALVLDDNADVSALKGWRRSIFGDRA
LAIKHGRIGLAATDEGIIEVPISQS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaattacggcaactgccgaactggcaaaattttgccaacacgccgcgcaattt
gatttcgtcactgttgataccgaatttctccgcgaaacgacctactggccaaaactttgt
ctggtccaggccgcaaccaccgaacaggctgtgctgatcgatccgctggccaaaggtatc
gatctttcgcccctgttcgaattgatggcaaatgccgccgtcaccaaggtgtttcacgcc
gcccgccaggatgtggaaattttcgtaaagctctccggtgacgtgccggtaaacctgttt
gacacccagatcgcagccagcgtctgcggttatggtgacagcgtttcctacgacaatctg
gtgcgctctgtcgttggcgtgcagatcgacaagagttcccggttcacggattggtcggcc
cgccccctgagcgagaaacagctcacctatgcgctggcagacgtcacccatctgcgcgat
atctatgtgacattgcgcgccaagattgacgagatggatcgcgccagctgggtagcggat
gaaaacgccacgctctccagcatcgacacctatatcgtcaagccggaagacgcctggcgc
cgcctgaagatgaaaatcaatcgcccgcgcgatctggctgccttgaaggcgctggccgca
tggcgcgaacagcgggcgcaggataacgaccagccgcgcggtcgcattctcaaggatgac
gccatatacgaactggccgtacaacgtccgcttcaggctgaaaaattcgacaagatgcgg
gtcgtgccacgtggatttggccgttcggcagctgctagcgaaattatcaaggtcctcaag
gaagttgaggatttgcccaaggatagcctgccgaccttgcccgcacgcgtccatggcccc
tcgcccaaaggtccgattggggatttgatccgggtgctgctgaaggctgtttccgagcgc
gagggtgtcgccgcgcggatcattgccacctctgacgatattgacgcgcttgtgctcgac
gacaatgcagacgtgtcggcgctcaagggttggcggcgctcaatattcggggaccgggct
ctcgcgatcaagcatggccgtatcggccttgccgcaacggacgaaggtattatcgaggta
ccaatcagccaatcgtga
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