Mariluticola halotolerans: L1P08_09825
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Entry
L1P08_09825 CDS
T09219
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mhar
Mariluticola halotolerans
Pathway
mhar02020
Two-component system
mhar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mhar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L1P08_09825 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L1P08_09825 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhar03021
]
L1P08_09825 (rpoN)
Transcription machinery [BR:
mhar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L1P08_09825 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
HTH_20
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UJQ93297
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All DBs
Position
2053598..2055106
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AA seq
502 aa
AA seq
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MALMPRLEIRQAQSLTLTPQLMQSIRLLQLSHLELNAFVETELERNPLLERDEVSDSEPL
TTPEYVTEGSPDRDTVDHGETMGSASSIAEQYDTDVSNVFPEQVGQDSVAQSLNKHREGP
SMIGLGEAPDIDSYVASQISLADHLREQINLILKQPAERLIAQHLIDNLNEAGYMMAACD
DIAAQLGATESDVEAVLQRVQGCDPLGVFGRNLSECLAIQLREKDRLDPMMQALLDNLDL
VAMHDMTALTRATGADRDDIADMLGELRELDPKPGRAFDGGPVQAVVPDVFVRRGNTGLW
EIELNTEVLPRVLVNRTYYASVTRKARNPGEKTFLTDCLQTANWLTKSLDQRAQTILKVA
AEIVRQQDAFLEHGIAHLKPMTLKAVAEEIDMHESTVSRVTSNKYLATPRGLFEMKYFFT
TALGSTTGGADHSAEAVRHRIRQLIEAESPKAILSDDTIAEMLKAEQGIDVARRTVAKYR
EGMNIPSSVIRRRQKKAMTHMA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatgccacggctcgaaatcaggcaggcgcagagcctgacgctgacgccccag
cttatgcagtcgatccggctgctgcagctcagccatcttgaactcaatgcctttgtggaa
accgaacttgagcgcaacccactgctcgagcgcgatgaagtgagcgacagtgaaccgctg
acgacacctgaatatgtgacggaaggcagcccggaccgcgatacggttgatcatggtgaa
accatggggtcggccagttcgattgccgaacaatatgacaccgatgtttccaatgtgttt
cccgaacaggtggggcaggacagcgtcgcccaatcgctgaacaaacatcgcgaaggaccg
agcatgatcgggcttggcgaagccccggacattgacagctatgtggccagccagatcagc
ctcgccgaccatttgcgcgagcaaatcaacctgatcctgaagcaacctgcggaacggctg
attgcccagcacctgatcgataacctcaacgaggccggctacatgatggcggcgtgtgac
gatatcgccgcacagctgggcgcaaccgagagcgatgtcgaggcggtgctgcaacgggtg
cagggttgtgacccccttggtgtgttcggacgcaacctgtcggaatgtcttgcgatccag
ttgcgcgaaaaagaccggctcgatccgatgatgcaggcattgctcgataatcttgatctt
gtggcgatgcatgacatgaccgccctgacccgtgcaactggcgcagaccgggacgacatt
gccgatatgctgggggaattgcgcgagcttgacccgaagccggggcgtgcctttgatggc
ggacctgtgcaggcagtggtgccggatgtattcgtccggcgcggcaatacagggctttgg
gaaattgaactgaataccgaggtactgccgcgcgtcctggttaatcgcacctattatgcc
agtgtaacgcgcaaggcgcgcaatccgggcgagaagacctttcttaccgattgcctgcag
actgccaactggctgaccaaaagcctcgatcagcgggcgcagaccattttgaaggtcgcc
gccgagatcgtccggcagcaggatgctttcctggaacacggcattgcgcatttgaagccc
atgaccctgaaagccgtggccgaagagatcgacatgcatgaatcgacggtgagccgggtc
acatccaacaaataccttgcgacaccgcgcgggttgtttgagatgaaatatttcttcacc
accgcgcttggatcaacaaccggtggcgccgaccattcggcagaagccgtgcggcaccgt
atccggcaattgatcgaggcggaaagtcccaaggctatcctttccgacgacacaattgcg
gaaatgctgaaggccgagcaggggatcgatgtggcacggcgtacggttgccaaataccgc
gagggcatgaacattccctcatcggttatccggcggcggcagaagaaagccatgacgcat
atggcctga
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