KEGG   Mariluticola halotolerans: L1P08_11160
Entry
L1P08_11160       CDS       T09219                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mhar  Mariluticola halotolerans
Pathway
mhar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    L1P08_11160 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhar03021]
    L1P08_11160 (rho)
   03019 Messenger RNA biogenesis [BR:mhar03019]
    L1P08_11160 (rho)
Transcription machinery [BR:mhar03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     L1P08_11160 (rho)
Messenger RNA biogenesis [BR:mhar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     L1P08_11160 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22 AAA_25 S1CSD-TOTE-2 ATPase_2 AAA Fungal_virus_P2_C DUF6360 AAA_14
Other DBs
NCBI-ProteinID: UJQ93545
LinkDB
Position
2342617..2343882
AA seq 421 aa
MQNMKLSELKAKSPAELLSFAEQLEVENASTLRKQELMFAILKQLASNDVDITGEGVVEI
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFSLRTGDTVEGQIRSPKDGERYFALLKVN
TINFEDPEAVRHKINFDNLTPLYPDERLRLEVADPTTKDRSARVLDLVAPLGKGQRALIV
APPRTGKTVLLQNIAQSIALNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAS
RHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEDGGSLTIISTALIDTGSRMDEVIFEEFKGTGNSEIILDRKVADKRIFPA
MDITKSGTRKEELLVDPDTLKKMYVLRRILNPMGTIDAMEFLLDKLKQTKTNSDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcagaatatgaagctcagtgagcttaaagccaaatcgccagcggaattgctgtcattt
gcagaacaactcgaagttgaaaacgcctctaccctgcgcaagcaggaattgatgtttgcg
attttgaaacaactcgcctccaatgatgtcgatattactggtgaaggtgtggtcgaaatc
ctctcggatggtttcggcttcttgcggtccccggatgcaaactacctgcccggtcccgat
gatatctatgtctctccctcccagatccggcggttttcgctgcgtacgggcgatacggtt
gagggtcagattcgctctcccaaggatggcgaacgctattttgcgctgctcaaggtcaat
acgatcaatttcgaagaccctgaagcggtccgtcacaagatcaatttcgacaatctcacg
ccgctttatcccgatgagcgcttgcgtctggaagttgccgatccaaccaccaaggatcgc
agtgcgcgggtacttgatctggttgcgccgcttggcaagggccagcgcgccctgatcgtt
gcgccgccgagaaccggtaaaaccgtattgttgcagaatatcgcacagtcgatcgcgctc
aatcatccggaatgctatttgatcgttctgttgatcgatgagcggccggaagaagttacc
gacatgcagcgttcggtaaagggcgaggtgatttcctcgacatttgacgaacctgcctcg
cgccacgttcaggtcgcggaaatggtgatcgagaaggcgaaacgcctggtcgagcacaaa
cgtgatgtggtgatccttcttgattccatcacgcgtttgggccgggcctacaacactgtt
gtgccctcttctggcaaggttttgaccggtggtgtcgatgccaatgcgctgcaacgtccg
aagcgttttttcggcgcggcgcggaatatcgaggatggcggttcgctgaccattatctcg
acagcgctgatcgataccggcagccgcatggatgaagtgatctttgaagaattcaagggc
accggtaactcggaaatcattctcgatcgcaaggttgccgacaaacgcatcttcccggcg
atggacatcaccaagtccggtacccgcaaggaagaattgctggtcgatccggatacgctc
aagaaaatgtatgtcttgcggcgtattctcaacccgatgggcacgatcgatgccatggaa
ttccttttggacaagctcaagcagaccaaaaccaattccgatttcttcgattcgatgaat
acctga

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