Mariluticola halotolerans: L1P08_15675
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Entry
L1P08_15675 CDS
T09219
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mhar
Mariluticola halotolerans
Pathway
mhar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1P08_15675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhar03019
]
L1P08_15675
Enzymes [BR:
mhar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L1P08_15675
Messenger RNA biogenesis [BR:
mhar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1P08_15675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
UJQ94375
LinkDB
All DBs
Position
3293687..3295162
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AA seq
491 aa
AA seq
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MTITDFAGLGLPKELVSSLAKAGFDTPTPIQGKAIPAQLQGRDILGIAQTGSGKTAAFGL
PIIAGIFALEGAPAPKSCRALILAPTRELAVQIEEMMRTYATYRRLTTALVLGGVSRQAQ
VQKLARGVDVLIATPGRLMDLLDDRKVRLDQTRWLVLDEADRMLDMGFIQPVRKIAAAIG
PKRQTALFSATMAPEIGKLAASLLNDPVKVEANIQGETVGKIDQQVILSGSKQKRDKLNE
LLADDSLNRVVVFSRTKHGADKVAKNLGIDGHTVAAIHGNKSQNARQSALRGFRDGRVRI
LVATDIVARGIDVPEITHVINYELPDDPENYVHRIGRTGRNGASGVAITLVDGTERSKLR
DVERLIRRTLPVTGTLPAGSENAEQRGAPARRGRPGNAGGRPANAGGRPGNGGQRAGEGR
GRNQSRPPQSGTDKGWWAKLDSEVGKEDGGRGEGKPSKGPKQRWNKRKKEGAQAARAGGG
GRPQRRNTSAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactatcactgattttgcaggccttggtttgcccaaggagcttgtcagctcgctggcc
aaagccggcttcgacaccccgaccccgatccagggcaaggctatccccgcgcagttgcag
ggccgtgacattctgggcatcgcccagaccggttcgggcaagacggcggcttttggcctg
ccgatcattgccggcatttttgcgcttgagggcgcaccggcaccgaaatcgtgccgggcg
ctgatccttgcgccgacccgtgaactggctgtgcagattgaagaaatgatgcgcacctat
gccacctatcgccgtttgaccacggcactggtgctcggcggtgtttcccgccaggcgcag
gtgcagaaactggcgcgcggcgttgacgtgttgattgccacaccgggccggttgatggat
ttgctggacgaccgcaaggtgcgtctggaccagacccgctggctggtgctcgatgaggcc
gaccgcatgctcgacatgggctttatccagccggtgcgcaagattgccgccgcgattggg
ccaaagcgccagaccgcgctgttttccgcaaccatggcccctgaaatcggcaagctggct
gccagcctgttgaatgatccggtcaaggtggaagccaatatccagggcgaaaccgttggc
aagattgaccagcaggtcattctttcgggctccaagcagaagcgcgacaagctcaacgaa
ttgctggctgatgacagcctcaatcgcgttgttgtgttttcgcgcaccaagcatggcgct
gacaaagtggccaagaaccttggcattgacgggcatacggttgccgccattcacggcaat
aaaagccagaatgcacgccagagcgcgctgcgcggcttccgcgatggccgtgtgcgtatc
ctcgtggccaccgatattgtggcgcgcggcattgacgtgcccgagatcacccatgtgatc
aattatgaactgccagacgatccggaaaactatgtgcaccgcattggccgtacgggccgc
aatggtgcatccggtgtggcgattacgctggttgacggcaccgaacgctcgaaactgcgc
gatgtggaacgcctgatccggcggacattgccggtgaccggcaccctgcctgcgggcagc
gaaaatgctgaacagcgcggtgccccggcacggcgtggccgccccggcaatgctggtgga
cgtcctgcgaatgcgggtggccgtccgggcaatggcgggcagcgcgcaggcgaaggccgc
ggccgcaaccagagccgtccgccgcaaagcggcacggacaagggctggtgggccaagctt
gattccgaggttggcaaggaagatggcggacgcggcgaaggcaaaccttccaaggggccg
aagcagcgttggaacaagcgcaagaaagaaggcgctcaggccgcccgcgccggtggcggt
ggccgtccgcagcgccgcaatacaagcgctgcttaa
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