Mycolicibacterium hassiacum: MHAS_02714
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Entry
MHAS_02714 CDS
T05715
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhas
Mycolicibacterium hassiacum
Pathway
mhas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHAS_02714 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhas03021
]
MHAS_02714 (rho)
03019 Messenger RNA biogenesis [BR:
mhas03019
]
MHAS_02714 (rho)
Transcription machinery [BR:
mhas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MHAS_02714 (rho)
Messenger RNA biogenesis [BR:
mhas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MHAS_02714 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
VWA_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VCT91001
LinkDB
All DBs
Position
1:complement(2883463..2885487)
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AA seq
674 aa
AA seq
DB search
MTETDLITAQGSDNNQLSIPVDQKNSTSAAAVSETTPAADGATDARATRTRSGRGSGALT
AMVLPELRALAKEIGVEGASGMRKSELIAAIREARAASNGKSRQNGDTKTGDAGTDTKAD
ATDAAVKDAKGGDDVTATTNQPEKAAADAADTKGGATETPAAEQPRRARRAAREPGAPAG
QADAGADAKADVKKADAKDDVKADVKDEAKTEGSAQTGTDAPATDTKADEKTGDEKTGAP
ETKPEADAGDQDGQGRAEDEGEGRQGRRGRRFRDRRRRERGGGDGEAELREDDVLQPVAG
ILDVLDNYAFVRTSGYLPGPNDVYVSMNMVRKYGLRRGDAITGAVRVPREGEQPNQRQKF
NPLVRIDSVNGGPVEAAKNRPEFSKLTPLYPNQRLRLETTPDKLTTRVIDLIMPIGKGQR
ALIVSPPKAGKTTVLQDIANAITTNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFD
RPPSDHTTVAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTA
LYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERR
VFPAVDVGPSGTRKDELLMSPDEFAVVHKLRRLLSGLDSHQAIDLLLNQLRKTKNNFEFL
MQVSKTAPGSMDVD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaacggacctgatcacagcccagggcagtgacaacaatcagctgtccatcccg
gtggatcagaagaattcgacgtccgctgcggctgtgtccgagaccactcccgccgcagac
ggtgccaccgacgcgcgcgccacccggaccaggtccggccgcggcagcggcgcgttgacc
gcgatggtgctgcccgagctgcgcgcactggccaaggagatcggtgtcgagggcgcgtcc
gggatgcgcaagagcgagttgatcgccgcgatccgtgaggcccgcgccgcgtccaacggc
aagagccgccagaacggggacaccaagaccggcgacgccggtaccgataccaaggcggac
gcgaccgatgcggccgtcaaagatgcgaagggcggcgacgatgtgaccgctaccacaaat
cagccggagaaggctgctgccgacgctgccgacaccaagggcggcgctaccgaaaccccc
gcggccgagcagccgcgacgcgcgcgcagggcggcccgggagcccggtgctccggccggg
caggccgacgccggggccgacgcgaaggccgacgtgaagaaggccgacgcgaaggacgac
gtgaaggccgacgtgaaggacgaggcgaagaccgagggttcggcccagaccgggaccgac
gcaccggccaccgacaccaaggccgacgagaagaccggcgacgagaagaccggcgcaccg
gagaccaagcccgaggccgacgccggcgaccaggacggccagggccgcgccgaggacgag
ggcgagggccgccagggacgtcgtggccgccggttccgtgaccggcgccgccgggaacgc
ggtggcggtgacggtgaggccgagctgcgcgaggacgacgtgctgcagccggtcgccggc
atcctcgacgtgctcgacaactacgcgttcgtccggacctccggctatctgccggggccg
aacgacgtgtacgtgtcgatgaacatggtgcgcaagtacggcctgcgccgcggcgatgcg
atcaccggcgcggtgcgggtgccgcgggagggcgagcagcccaatcagcggcagaagttc
aacccgctggtgcgcatcgacagcgtcaacggcggcccggtcgaggcggccaagaaccgg
ccggagttcagcaagctgaccccgctgtacccgaatcagcggctgcggctggagaccacg
ccggacaagctcaccacccgggtgatcgacctgatcatgccgatcggcaaggggcagcgc
gcgctgatcgtgtcgccgcccaaggccggtaagaccaccgtcctgcaggacatcgccaac
gcgatcacgaccaacaacccggaatgccacctgatggtggtgctcgtcgacgagcgtccg
gaggaggtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgac
cgcccgccgtccgaccacaccaccgtcgccgagctggccatcgagcgggccaagcggctg
gtggagcagggcaaggacgtggtcgtgctgctcgactcgatcacccgactgggccgggcg
tacaacaacgcctcgccggcgtcgggccggatcctgtccggcggtgtggactccaccgcg
ctgtacccgccgaagcggttcctcggcgcggcccgcaacatcgaggagggcggttcgctg
accatcatcgccaccgcgatggtcgagaccggctccaccggtgacaccgtgatcttcgag
gagttcaagggcaccggtaacgccgagctcaagctcgatcgcaagatcgccgagcggcgg
gtgttcccggccgtcgacgtcggcccgtccggcacccgcaaggacgagctgctgatgtcg
cccgacgagttcgcggtcgtgcacaagctgcgccgcctgctgagcggcctggacagccac
caggcgatcgacctgctgctcaaccagctgcgcaagaccaagaacaacttcgagttcctg
atgcaggtctccaagaccgcaccgggctcgatggacgtcgactga
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